CRAN Package Check Results for Package plsRglm

Last updated on 2017-07-26 01:56:26.

Check Details

Version: 1.1.1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘MASS’ ‘plsdof’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.1.1
Check: R code for possible problems
Result: NOTE
    PLS_glm: no visible global function definition for ‘Gamma’
    PLS_glm: no visible global function definition for ‘gaussian’
    PLS_glm: no visible global function definition for ‘inverse.gaussian’
    PLS_glm: no visible global function definition for ‘binomial’
    PLS_glm: no visible global function definition for ‘poisson’
    PLS_glm: no visible global function definition for ‘weighted.mean’
    PLS_glm: no visible binding for global variable ‘weighted.mean’
    PLS_glm: no visible global function definition for ‘pnorm’
    PLS_glm: no visible global function definition for ‘coef’
    PLS_glm: no visible global function definition for ‘glm’
    PLS_glm: no visible binding for global variable ‘na.exclude’
    PLS_glm: no visible global function definition for ‘AIC’
    PLS_glm: no visible global function definition for ‘residuals.glm’
    PLS_glm: no visible global function definition for ‘predict’
    PLS_glm: no visible global function definition for ‘model.frame’
    PLS_glm: no visible global function definition for ‘model.matrix’
    PLS_glm: no visible global function definition for ‘lm’
    PLS_glm_formula: no visible binding for global variable ‘na.exclude’
    PLS_glm_formula: no visible binding for global variable ‘na.pass’
    PLS_glm_formula: no visible global function definition for
     ‘model.response’
    PLS_glm_formula: no visible global function definition for
     ‘is.empty.model’
    PLS_glm_formula: no visible global function definition for
     ‘model.matrix’
    PLS_glm_formula: no visible global function definition for
     ‘model.weights’
    PLS_glm_formula: no visible global function definition for
     ‘model.offset’
    PLS_glm_formula: no visible global function definition for ‘Gamma’
    PLS_glm_formula: no visible global function definition for ‘gaussian’
    PLS_glm_formula: no visible global function definition for
     ‘inverse.gaussian’
    PLS_glm_formula: no visible global function definition for ‘binomial’
    PLS_glm_formula: no visible global function definition for ‘poisson’
    PLS_glm_formula: no visible global function definition for
     ‘weighted.mean’
    PLS_glm_formula: no visible binding for global variable ‘weighted.mean’
    PLS_glm_formula: no visible global function definition for ‘pnorm’
    PLS_glm_formula: no visible global function definition for ‘coef’
    PLS_glm_formula: no visible global function definition for ‘AIC’
    PLS_glm_formula: no visible global function definition for
     ‘residuals.glm’
    PLS_glm_formula: no visible global function definition for ‘predict’
    PLS_glm_formula: no visible global function definition for
     ‘model.frame’
    PLS_glm_formula: no visible global function definition for ‘lm’
    PLS_glm_kfoldcv: no visible global function definition for ‘Gamma’
    PLS_glm_kfoldcv: no visible global function definition for ‘gaussian’
    PLS_glm_kfoldcv: no visible global function definition for
     ‘inverse.gaussian’
    PLS_glm_kfoldcv: no visible global function definition for ‘binomial’
    PLS_glm_kfoldcv: no visible global function definition for ‘poisson’
    PLS_glm_kfoldcv_formula: no visible binding for global variable
     ‘na.pass’
    PLS_glm_kfoldcv_formula: no visible global function definition for
     ‘model.response’
    PLS_glm_kfoldcv_formula: no visible global function definition for
     ‘is.empty.model’
    PLS_glm_kfoldcv_formula: no visible global function definition for
     ‘model.matrix’
    PLS_glm_kfoldcv_formula: no visible global function definition for
     ‘model.weights’
    PLS_glm_kfoldcv_formula: no visible global function definition for
     ‘model.offset’
    PLS_glm_kfoldcv_formula: no visible global function definition for
     ‘Gamma’
    PLS_glm_kfoldcv_formula: no visible global function definition for
     ‘gaussian’
    PLS_glm_kfoldcv_formula: no visible global function definition for
     ‘inverse.gaussian’
    PLS_glm_kfoldcv_formula: no visible global function definition for
     ‘binomial’
    PLS_glm_kfoldcv_formula: no visible global function definition for
     ‘poisson’
    PLS_glm_wvc: no visible global function definition for ‘Gamma’
    PLS_glm_wvc: no visible global function definition for ‘gaussian’
    PLS_glm_wvc: no visible global function definition for
     ‘inverse.gaussian’
    PLS_glm_wvc: no visible global function definition for ‘binomial’
    PLS_glm_wvc: no visible global function definition for ‘poisson’
    PLS_glm_wvc: no visible global function definition for ‘weighted.mean’
    PLS_glm_wvc: no visible binding for global variable ‘weighted.mean’
    PLS_glm_wvc: no visible global function definition for ‘coef’
    PLS_glm_wvc: no visible global function definition for ‘glm’
    PLS_glm_wvc: no visible binding for global variable ‘na.exclude’
    PLS_glm_wvc: no visible global function definition for ‘predict’
    PLS_lm: no visible global function definition for ‘weighted.mean’
    PLS_lm: no visible binding for global variable ‘weighted.mean’
    PLS_lm: no visible global function definition for ‘pnorm’
    PLS_lm: no visible global function definition for ‘AIC’
    PLS_lm: no visible global function definition for ‘lm’
    PLS_lm: no visible global function definition for ‘predict’
    PLS_lm_formula: no visible binding for global variable ‘na.pass’
    PLS_lm_formula: no visible global function definition for
     ‘model.response’
    PLS_lm_formula: no visible global function definition for
     ‘is.empty.model’
    PLS_lm_formula: no visible global function definition for
     ‘model.matrix’
    PLS_lm_formula: no visible global function definition for
     ‘model.weights’
    PLS_lm_formula: no visible global function definition for
     ‘weighted.mean’
    PLS_lm_formula: no visible binding for global variable ‘weighted.mean’
    PLS_lm_formula: no visible global function definition for ‘pnorm’
    PLS_lm_formula: no visible global function definition for ‘AIC’
    PLS_lm_formula: no visible global function definition for ‘lm’
    PLS_lm_formula: no visible global function definition for ‘predict’
    PLS_lm_kfoldcv_formula: no visible binding for global variable
     ‘na.pass’
    PLS_lm_kfoldcv_formula: no visible global function definition for
     ‘model.response’
    PLS_lm_kfoldcv_formula: no visible global function definition for
     ‘is.empty.model’
    PLS_lm_kfoldcv_formula: no visible global function definition for
     ‘model.matrix’
    PLS_lm_kfoldcv_formula: no visible global function definition for
     ‘model.weights’
    PLS_lm_wvc: no visible global function definition for ‘weighted.mean’
    PLS_lm_wvc: no visible binding for global variable ‘weighted.mean’
    boxplots.bootpls: no visible global function definition for ‘par’
    boxplots.bootpls: no visible global function definition for ‘boxplot’
    boxplots.bootpls: no visible global function definition for ‘axis’
    boxplots.bootpls: no visible global function definition for ‘abline’
    boxplots.bootpls: no visible global function definition for ‘points’
    kfolds2CVinfos_glm: no visible global function definition for ‘Gamma’
    kfolds2CVinfos_glm: no visible global function definition for
     ‘gaussian’
    kfolds2CVinfos_glm: no visible global function definition for
     ‘inverse.gaussian’
    kfolds2CVinfos_glm: no visible global function definition for
     ‘binomial’
    kfolds2CVinfos_glm: no visible global function definition for ‘poisson’
    kfolds2Chisq: no visible binding for global variable ‘family’
    kfolds2Chisq: no visible global function definition for ‘Gamma’
    kfolds2Chisq: no visible global function definition for ‘gaussian’
    kfolds2Chisq: no visible global function definition for
     ‘inverse.gaussian’
    kfolds2Chisq: no visible global function definition for ‘binomial’
    kfolds2Chisq: no visible global function definition for ‘poisson’
    kfolds2Chisq: no visible global function definition for ‘model.frame’
    kfolds2Chisq: no visible global function definition for ‘model.matrix’
    kfolds2Chisqind: no visible binding for global variable ‘family’
    kfolds2Chisqind: no visible global function definition for ‘Gamma’
    kfolds2Chisqind: no visible global function definition for ‘gaussian’
    kfolds2Chisqind: no visible global function definition for
     ‘inverse.gaussian’
    kfolds2Chisqind: no visible global function definition for ‘binomial’
    kfolds2Chisqind: no visible global function definition for ‘poisson’
    kfolds2Chisqind: no visible global function definition for
     ‘model.frame’
    kfolds2Chisqind: no visible global function definition for
     ‘model.matrix’
    kfolds2Mclassed: no visible binding for global variable ‘family’
    kfolds2Mclassed: no visible global function definition for ‘Gamma’
    kfolds2Mclassed: no visible global function definition for ‘gaussian’
    kfolds2Mclassed: no visible global function definition for
     ‘inverse.gaussian’
    kfolds2Mclassed: no visible global function definition for ‘binomial’
    kfolds2Mclassed: no visible global function definition for ‘poisson’
    kfolds2Mclassedind: no visible binding for global variable ‘family’
    kfolds2Mclassedind: no visible global function definition for ‘Gamma’
    kfolds2Mclassedind: no visible global function definition for
     ‘gaussian’
    kfolds2Mclassedind: no visible global function definition for
     ‘inverse.gaussian’
    kfolds2Mclassedind: no visible global function definition for
     ‘binomial’
    kfolds2Mclassedind: no visible global function definition for ‘poisson’
    plot.table.summary.cv.plsRglmmodel: no visible global function
     definition for ‘barplot’
    plot.table.summary.cv.plsRglmmodel: no visible global function
     definition for ‘text’
    plot.table.summary.cv.plsRmodel: no visible global function definition
     for ‘barplot’
    plot.table.summary.cv.plsRmodel: no visible global function definition
     for ‘text’
    plots.confints.bootpls: no visible global function definition for ‘par’
    plots.confints.bootpls: no visible global function definition for
     ‘plot’
    plots.confints.bootpls: no visible global function definition for
     ‘arrows’
    plots.confints.bootpls: no visible global function definition for
     ‘axis’
    plots.confints.bootpls: no visible global function definition for
     ‘abline’
    plots.confints.bootpls: no visible global function definition for
     ‘legend’
    predict.plsRglmmodel: no visible global function definition for
     ‘predict’
    predict.plsRglmmodel: no visible binding for global variable ‘na.pass’
    predict.plsRglmmodel: no visible global function definition for
     ‘is.empty.model’
    predict.plsRglmmodel: no visible global function definition for
     ‘model.matrix’
    predict.plsRglmmodel: no visible binding for global variable
     ‘contrasts’
    predict.plsRglmmodel: no visible global function definition for
     ‘model.weights’
    predict.plsRmodel: no visible binding for global variable ‘na.pass’
    predict.plsRmodel: no visible global function definition for
     ‘is.empty.model’
    predict.plsRmodel: no visible global function definition for
     ‘model.matrix’
    predict.plsRmodel: no visible binding for global variable ‘contrasts’
    predict.plsRmodel: no visible global function definition for
     ‘model.weights’
    signpred: no visible global function definition for ‘strwidth’
    signpred: no visible global function definition for ‘par’
    simul_data_UniYX_binom: no visible global function definition for
     ‘make.link’
    simul_data_UniYX_binom: no visible global function definition for
     ‘rbinom’
    Undefined global functions or variables:
     AIC Gamma abline arrows axis barplot binomial boxplot coef contrasts
     family gaussian glm inverse.gaussian is.empty.model legend lm
     make.link model.frame model.matrix model.offset model.response
     model.weights na.exclude na.pass par plot pnorm points poisson
     predict rbinom residuals.glm strwidth text weighted.mean
    Consider adding
     importFrom("graphics", "abline", "arrows", "axis", "barplot",
     "boxplot", "legend", "par", "plot", "points", "strwidth",
     "text")
     importFrom("stats", "AIC", "Gamma", "binomial", "coef", "contrasts",
     "family", "gaussian", "glm", "inverse.gaussian",
     "is.empty.model", "lm", "make.link", "model.frame",
     "model.matrix", "model.offset", "model.response",
     "model.weights", "na.exclude", "na.pass", "pnorm",
     "poisson", "predict", "rbinom", "residuals.glm",
     "weighted.mean")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64