Last updated on 2017-07-26 01:56:39.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.3.3 | 1.05 | 33.34 | 34.39 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.3.3 | 1.05 | 31.73 | 32.78 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.3.3 | 41.18 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.3.3 | 40.71 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 1.3.3 | 6.00 | 56.00 | 62.00 | NOTE | |
| r-patched-linux-x86_64 | 1.3.3 | 1.06 | 32.03 | 33.08 | NOTE | |
| r-patched-solaris-x86 | 1.3.3 | 48.90 | NOTE | |||
| r-release-linux-x86_64 | 1.3.3 | 1.06 | 31.93 | 33.00 | NOTE | |
| r-release-windows-ix86+x86_64 | 1.3.3 | 3.00 | 53.00 | 56.00 | NOTE | |
| r-release-osx-x86_64 | 1.3.3 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.3.3 | 4.00 | 47.00 | 51.00 | NOTE | |
| r-oldrel-osx-x86_64 | 1.3.3 | NOTE |
Version: 1.3.3
Check: dependencies in R code
Result: NOTE
'library' or 'require' calls in package code:
‘MASS’ ‘oligoClasses’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.3.3
Check: R code for possible problems
Result: NOTE
abf: no visible global function definition for ‘qnorm’
abf: no visible global function definition for ‘dnorm’
analyse.models: no visible global function definition for ‘read.table’
buildSNPannotation: no visible global function definition for ‘db’
buildSNPannotation: no visible global function definition for
‘dbListFields’
buildSNPannotation: no visible global function definition for
‘dbGetQuery’
chisqClass2: no visible global function definition for ‘pchisq’
colEpistatic: no visible global function definition for ‘glm’
colEpistatic: no visible global function definition for ‘is’
colEpistatic: no visible global function definition for ‘pchisq’
compChisqPval: no visible global function definition for ‘pchisq’
computeContCells: no visible global function definition for ‘as.dist’
dist2Mats: no visible global function definition for ‘dist’
fblr : trunc.norm: no visible global function definition for ‘qnorm’
fblr : trunc.norm: no visible global function definition for ‘pnorm’
fblr : trunc.norm: no visible global function definition for ‘runif’
fblr : gen.cand: no visible global function definition for ‘runif’
fblr : change: no visible global function definition for ‘runif’
fblr: no visible global function definition for ‘write.table’
fblr: no visible global function definition for ‘rgamma’
fblr: no visible global function definition for ‘runif’
fblr: no visible global function definition for ‘mvrnorm’
fblr: no visible global function definition for ‘pnorm’
fblr.weight : trunc.norm: no visible global function definition for
‘qnorm’
fblr.weight : trunc.norm: no visible global function definition for
‘pnorm’
fblr.weight : trunc.norm: no visible global function definition for
‘runif’
fblr.weight : gen.cand: no visible global function definition for
‘runif’
fblr.weight : change: no visible global function definition for ‘runif’
fblr.weight: no visible global function definition for ‘write.table’
fblr.weight: no visible global function definition for ‘rgamma’
fblr.weight: no visible global function definition for ‘runif’
fblr.weight: no visible global function definition for ‘mvrnorm’
fblr.weight: no visible global function definition for ‘pnorm’
pamCat: no visible global function definition for ‘predict’
predictFBLR : predictBLR: no visible global function definition for
‘pnorm’
predictFBLR: no visible global function definition for ‘read.table’
rowCATTs: no visible global function definition for ‘pchisq’
rowChisq2Class: no visible global function definition for ‘pchisq’
rowChisqMultiClass: no visible global function definition for ‘pchisq’
rowCors: no visible global function definition for ‘sd’
rowHWEs: no visible global function definition for ‘pchisq’
rowMsquares: no visible global function definition for ‘pchisq’
rowTrendFuzzy: no visible global function definition for ‘pnorm’
rowTrendStats: no visible global function definition for ‘pchisq’
simulateSNPcatResponse: no visible global function definition for
‘runif’
simulateSNPglm: no visible global function definition for ‘runif’
simulateSNPglm: no visible global function definition for ‘rbinom’
simulateSNPs: no visible global function definition for ‘runif’
Undefined global functions or variables:
as.dist db dbGetQuery dbListFields dist dnorm glm is mvrnorm pchisq
pnorm predict qnorm rbinom read.table rgamma runif sd write.table
Consider adding
importFrom("methods", "is")
importFrom("stats", "as.dist", "dist", "dnorm", "glm", "pchisq",
"pnorm", "predict", "qnorm", "rbinom", "rgamma", "runif",
"sd")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.3.3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘oligoClasses’
Flavor: r-release-osx-x86_64