Exploratory data analysis and data visualization for biological sequence (DNA and protein) data. Includes also utilities for sequence data management under the ACNUC system.
| Version: | 3.3-6 |
| Depends: | R (≥ 2.10.0) |
| Imports: | ade4, segmented |
| Published: | 2017-04-06 |
| Author: | Delphine Charif [aut], Olivier Clerc [ctb], Carolin Frank [ctb], Jean R. Lobry [aut, cph], Anamaria Necşulea [ctb], Leonor Palmeira [ctb], Simon Penel [cre], Guy Perrière [ctb] |
| Maintainer: | Simon Penel <simon.penel at univ-lyon1.fr> |
| BugReports: | http://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/seqinr-forum |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | http://seqinr.r-forge.r-project.org/ |
| NeedsCompilation: | yes |
| SystemRequirements: | zlib headers and library. |
| Citation: | seqinr citation info |
| In views: | Genetics |
| CRAN checks: | seqinr results |
| Reference manual: | seqinr.pdf |
| Package source: | seqinr_3.3-6.tar.gz |
| Windows binaries: | r-devel: seqinr_3.3-6.zip, r-release: seqinr_3.3-6.zip, r-oldrel: seqinr_3.3-6.zip |
| OS X El Capitan binaries: | r-release: seqinr_3.3-6.tgz |
| OS X Mavericks binaries: | r-oldrel: seqinr_3.3-6.tgz |
| Old sources: | seqinr archive |
| Reverse depends: | Autoplotprotein, CNOGpro, DCODE, EnsCat, LncFinder, LSPFP, MEET, mlgt, plotprotein, SMM |
| Reverse imports: | adegenet, alakazam, aLFQ, AlignStat, AmyloGram, AnnotationBustR, apmsWAPP, caRpools, CONDOP, cooccurNet, dartR, evobiR, gkmSVM, gquad, hoardeR, MAGNAMWAR, metacoder, prozor, PTXQC, SafeQuant, shazam, signalHsmm, sivipm |
| Reverse suggests: | biomartr, cubfits, phangorn, rnaseqWrapper, SimRAD, TKF, vhica |
| Reverse enhances: | spgs |
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