Fits a hidden rates model that allows different transition rate
classes on different portions of a phylogeny by treating rate classes as hidden
states in a Markov process and various other functions for evaluating models of
binary character evolution.
| Version: |
1.22 |
| Depends: |
ape, nloptr, GenSA |
| Imports: |
expm, numDeriv, corpcor, nnet, phangorn, parallel, Rmpfr |
| Published: |
2017-07-19 |
| Author: |
Jeremy M. Beaulieu, Jeffrey C. Oliver, Brian O'Meara |
| Maintainer: |
Jeremy Beaulieu <jbeaulieu at nimbios.org> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: |
no |
| In views: |
Phylogenetics |
| CRAN checks: |
corHMM results |