iRefR: iRefIndex Manager

"iRefR" allows the user to load any version of the consolidated protein interaction database "iRefIndex" and perform tasks such as: selecting databases, pmids, experimental methods, searching for specific proteins, separate binary interactions from complexes and polymers, generate complexes according to an algorithm that looks after possible binary-represented complexes, make general database statistics and create network graphs, among others.

Version: 1.13
Depends: R (≥ 2.12.1), igraph (≥ 0.6), graph, RBGL
Published: 2013-12-17
Author: Antonio Mora, Ian Donaldson
Maintainer: Antonio Mora <antoniocmora at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Materials: NEWS
CRAN checks: iRefR results


Reference manual: iRefR.pdf
Package source: iRefR_1.13.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X El Capitan binaries: r-release: not available
OS X Mavericks binaries: r-oldrel: iRefR_1.13.tgz
Old sources: iRefR archive


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