CRAN Package Check Results for Package largeVis

Last updated on 2017-12-20 00:46:58 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.1 190.80 45.53 236.33 OK --no-examples --no-tests --no-vignettes
r-devel-linux-x86_64-debian-gcc 0.2.1 OK --no-examples --no-tests --no-vignettes
r-devel-linux-x86_64-fedora-clang 0.2.1 462.89 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2.1 449.58 NOTE
r-devel-windows-ix86+x86_64 0.2.1 549.00 191.00 740.00 NOTE
r-patched-linux-x86_64 0.2.1 201.81 57.46 259.27 OK --no-examples --no-tests --no-vignettes
r-patched-solaris-x86 0.2.1 403.20 ERROR
r-release-linux-x86_64 0.2.1 204.92 56.88 261.80 OK --no-examples --no-tests --no-vignettes
r-release-windows-ix86+x86_64 0.2.1 412.00 210.00 622.00 NOTE
r-release-osx-x86_64 0.2.1 NOTE
r-oldrel-windows-ix86+x86_64 0.2.1 575.00 219.00 794.00 NOTE
r-oldrel-osx-x86_64 0.2.1 NOTE

Check Details

Version: 0.2.1
Check: installed package size
Result: NOTE
     installed size is 18.7Mb
     sub-directories of 1Mb or more:
     libs 13.7Mb
     testdata 1.8Mb
     vignettedata 2.0Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.2.1
Check: examples
Result: ERROR
    Running examples in ‘largeVis-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: as.dendrogram.hdbscan
    > ### Title: as.dendrogram.hdbscan
    > ### Aliases: as.dendrogram.hdbscan
    >
    > ### ** Examples
    >
    > data(iris)
    > vis <- largeVis(t(iris[,1:4]), K = 20, sgd_batches = 1, threads = 1)
    Error: C stack usage 193490240 is too close to the limit
    
    error:
    error: Mat::col(): index out of bounds
    Mat::col(): index out of bounds
    terminate called after throwing an instance of 'std::logic_error'
     what(): Mat::col(): index out of bounds
Flavor: r-patched-solaris-x86

Version: 0.2.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [7s/24s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(largeVis)
     Loading required package: Matrix
     largeVis was compiled with 32-bit types. This will limit the size of the datasets it can process. Consider recompiling with -DARMA_64BIT_WORD
     >
     > test_check("largeVis")
     Error: C stack usage 194865984 is too close to the limit
     Error: C stack usage 194865984 is too close to the limit
     Error: C stack usage 194865984 is too close to the limit
    
     *** caught segfault ***
     address 2d6d0, cause 'memory not mapped'
     An irrecoverable exception occurred. R is aborting now ...
Flavor: r-patched-solaris-x86

Version: 0.2.1
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    largeVis was compiled with 32-bit types. This will limit the size of the datasets it can process. Consider recompiling with -DARMA_64BIT_WORD
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in unit(c(t, r, b, l), unit) : NAs introduced by coercion
    Error: C stack usage 309095744 is too close to the limit
    
    error: Mat::col(): index out of bounds
    
    error: Mat::col(): index out of bounds
    terminate called recursively
Flavor: r-patched-solaris-x86