Implementation of the genetic class level association testing (GenCAT) method from SNP level association data. Refer to: "Qian J, Nunez S, Reed E, Reilly MP, Foulkes AS (2016) <doi:10.1371/journal.pone.0148218> A Simple Test of Class-Level Genetic Association Can Reveal Novel Cardiometabolic Trait Loci. PLoS ONE 11(2): e0148218".
| Version: | 1.0.3 |
| Depends: | R (≥ 2.10), stats, dplyr, doParallel, ggplot2, foreach, parallel, methods |
| Suggests: | snpStats, knitr |
| Published: | 2016-06-10 |
| Author: | Eric Reed, Sara Nunez, Jing Qian, Andrea Foulkes |
| Maintainer: | Eric Reed <reeder at bu.edu> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | GenCAT results |
| Reference manual: | GenCAT.pdf |
| Vignettes: |
GenCAT Package |
| Package source: | GenCAT_1.0.3.tar.gz |
| Windows binaries: | r-devel: GenCAT_1.0.3.zip, r-release: GenCAT_1.0.3.zip, r-oldrel: GenCAT_1.0.3.zip |
| OS X El Capitan binaries: | r-release: GenCAT_1.0.3.tgz |
| OS X Mavericks binaries: | r-oldrel: GenCAT_1.0.3.tgz |
| Old sources: | GenCAT archive |
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