PAC: Partition-Assisted Clustering and Multiple Alignments of Networks

Implements Partition-Assisted Clustering and Multiple Alignments of Networks. It 1) utilizes partition-assisted clustering to find robust and accurate clusters and 2) discovers coherent relationships of clusters across multiple samples. It is particularly useful for analyzing single-cell data set.

Version: 1.0.9
Imports: Rcpp (≥ 0.12.2), igraph, parmigene, infotheo, dplyr, Rtsne, ggplot2, ggrepel
LinkingTo: Rcpp
Suggests: knitr, NMF
Published: 2017-08-16
Author: Ye Henry Li, Dangna Li
Maintainer: Ye Henry Li <ywli at>
License: GPL-3
NeedsCompilation: yes
SystemRequirements: C++11
CRAN checks: PAC results


Reference manual: PAC.pdf
Vignettes: Using the PAC package
Package source: PAC_1.0.9.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X El Capitan binaries: r-release: PAC_1.0.9.tgz
OS X Mavericks binaries: r-oldrel: PAC_1.0.9.tgz
Old sources: PAC archive


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