Create pretty visualizations of alpha-helical peptide sequences in R. The amino acid type (polar, hydrophobic, etc.) is denoted by color. This package allows creation of helical wheels, and the newer Wenxiang diagrams. Future versions aim to include increased customizability of the two existing visualizations, as well as a visualization for the helical net diagram.
| Version: | 0.1.0 |
| Depends: | R (≥ 3.2.5) |
| Imports: | rJava (≥ 0.9) |
| Suggests: | knitr, rmarkdown |
| Published: | 2017-06-26 |
| Author: | Raoul Wadhwa [cre, aut], Regina Stevens-Truss [aut] |
| Maintainer: | Raoul Wadhwa <raoulwadhwa at gmail.com> |
| BugReports: | https://github.com/rrrlw/helixvis/issues |
| License: | GPL-3 |
| URL: | https://github.com/rrrlw/helixvis |
| NeedsCompilation: | no |
| SystemRequirements: | Java JDK 1.8 or higher |
| Materials: | README |
| CRAN checks: | helixvis results |
| Reference manual: | helixvis.pdf |
| Vignettes: |
Visualization with helixvis |
| Package source: | helixvis_0.1.0.tar.gz |
| Windows binaries: | r-devel: helixvis_0.1.0.zip, r-release: helixvis_0.1.0.zip, r-oldrel: helixvis_0.1.0.zip |
| OS X El Capitan binaries: | r-release: helixvis_0.1.0.tgz |
| OS X Mavericks binaries: | r-oldrel: not available |
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