SPRINT (Simple Parallel R INTerface) is a parallel framework for R. It provides a High Performance Computing (HPC) harness which allows R scripts to run on HPC clusters. SPRINT contains a library of selected R functions that have been parallelized. Functions are named after the original R function with the added prefix 'p', i.e. the parallel version of cor() in SPRINT is called pcor(). Call to the parallel R functions are included directly in standard R scripts. SPRINT contains functions for correlation (pcor), partitioning around medoids (ppam), apply (papply), permutation testing (pmaxT), bootstrapping (pboot), random forest (prandomForest), rank product (pRP) and hamming distance (pstringdistmatrix).
| Version: | 1.0.7 |
| Depends: | R (≥ 2.9.2), rlecuyer, ff (≥ 2.1-1), randomForest |
| Imports: | boot, e1071 |
| Suggests: | cluster, stringdist, RUnit, Matrix, SparseM, multtest, Biostrings, ShortRead, golubEsets, RankProd |
| OS_type: | unix |
| Published: | 2014-09-29 |
| Author: | University of Edinburgh SPRINT Team |
| Maintainer: | Eilidh Troup <e.troup at epcc.ed.ac.uk> |
| Contact: | University of Edinburgh SPRINT Team <sprint@ed.ac.uk> |
| License: | GPL (≥ 3) |
| Copyright: | University of Edinburgh |
| URL: | http://www.r-sprint.org |
| NeedsCompilation: | yes |
| SystemRequirements: | MPI(>= 2.0) |
| Citation: | sprint citation info |
| Materials: | README NEWS |
| In views: | HighPerformanceComputing |
| CRAN checks: | sprint results |
| Reference manual: | sprint.pdf |
| Package source: | sprint_1.0.7.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| OS X El Capitan binaries: | r-release: not available |
| OS X Mavericks binaries: | r-oldrel: not available |
| Old sources: | sprint archive |
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