Contains the REIDS model presented in Van Moerbeke et al (2017) <doi:10.1186/s12859-017-1687-8> for the detection of alternative splicing. The method is extended by incorporating junction information for the assessment of alternative splicing. The vignette introduces the model and shows an example work flow.
| Version: | 0.0.1 |
| Depends: | R (≥ 2.10), aroma.affymetrix, aroma.core |
| Imports: | data.table, RColorBrewer, MCMCpack, lmtest |
| Published: | 2018-02-22 |
| Author: | Marijke Van Moerbeke |
| Maintainer: | Marijke Van Moerbeke <marijke.vanmoerbeke at uhasselt.be> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| CRAN checks: | REIDS results |
| Reference manual: | REIDS.pdf |
| Vignettes: |
REIDSvignette |
| Package source: | REIDS_0.0.1.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| OS X El Capitan binaries: | r-release: REIDS_0.0.1.tgz |
| OS X Mavericks binaries: | r-oldrel: not available |
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