REIDS: Random Effects for the Identification of Differential Splicing

Contains the REIDS model presented in Van Moerbeke et al (2017) <doi:10.1186/s12859-017-1687-8> for the detection of alternative splicing. The method is extended by incorporating junction information for the assessment of alternative splicing. The vignette introduces the model and shows an example work flow.

Version: 0.0.1
Depends: R (≥ 2.10), aroma.affymetrix, aroma.core
Imports: data.table, RColorBrewer, MCMCpack, lmtest
Published: 2018-02-22
Author: Marijke Van Moerbeke
Maintainer: Marijke Van Moerbeke <marijke.vanmoerbeke at uhasselt.be>
License: GPL-3
NeedsCompilation: no
CRAN checks: REIDS results

Downloads:

Reference manual: REIDS.pdf
Vignettes: REIDSvignette
Package source: REIDS_0.0.1.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
OS X El Capitan binaries: r-release: REIDS_0.0.1.tgz
OS X Mavericks binaries: r-oldrel: not available

Linking:

Please use the canonical form https://CRAN.R-project.org/package=REIDS to link to this page.