CRAN Package Check Results for Package FastPCS

Last updated on 2018-04-29 01:46:47 CEST.

Check Details

Version: 0.1.2
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.FastPCS
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.1.2
Check: R code for possible problems
Result: NOTE
    FastPCS: no visible global function definition for ‘complete.cases’
    FastPCS: no visible global function definition for ‘cov’
    FastPCS: no visible global function definition for ‘mahalanobis’
    FastPCS: no visible global function definition for ‘qchisq’
    FastPCS: no visible global function definition for ‘quantile’
    plot.FastPCS: no visible global function definition for ‘plot’
    plot.FastPCS: no visible global function definition for ‘abline’
    plot.FastPCS: no visible global function definition for ‘qchisq’
    Undefined global functions or variables:
     abline complete.cases cov mahalanobis plot qchisq quantile
    Consider adding
     importFrom("graphics", "abline", "plot")
     importFrom("stats", "complete.cases", "cov", "mahalanobis", "qchisq",
     "quantile")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.1.2
Check: compiled code
Result: NOTE
    File ‘FastPCS/libs/FastPCS.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.2
Check: examples
Result: ERROR
    Running examples in ‘FastPCS-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: plot.FastPCS
    > ### Title: Distance plot for FastPCS
    > ### Aliases: plot.FastPCS
    > ### Keywords: hplot robust multivariate
    >
    > ### ** Examples
    >
    > ## generate data
    > set.seed(123)
    > n<-100
    > p<-3
    > x0<-matrix(rnorm(n*p),nc=p)
    > x0[1:30,]<-matrix(rnorm(30*p,4.5,1/100),nc=p)
    > z<-c(rep(0,30),rep(1,70))
    > nstart<-FPCSnumStarts(p=p,eps=0.4)
    > results<-FastPCS(x=x0,nSamp=nstart)
    > colvec<-rep("orange",length(z))
    > colvec[z==1]<-"blue"
    > plot(results,col=colvec,pch=16)
    Error in xy.coords(x, y, xlabel, ylabel, log) :
     'x' is a list, but does not have components 'x' and 'y'
    Calls: plot -> plot.default -> xy.coords
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.2
Check: installed package size
Result: NOTE
     installed size is 9.2Mb
     sub-directories of 1Mb or more:
     libs 9.1Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-osx-x86_64, r-oldrel-osx-x86_64