CRAN Package Check Results for Package mixdist

Last updated on 2018-04-29 01:47:10 CEST.

Check Details

Version: 0.5-4
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     anova.mix coef.mix fitted.mix plot.mix plot.mixdata print.mix
     summary.mix
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.5-4
Check: R code for possible problems
Result: NOTE
    anova.mix: no visible global function definition for ‘pchisq’
    groupstats: no visible global function definition for ‘var’
    grpintprob: no visible binding for global variable ‘pnorm’
    grpintprob: no visible binding for global variable ‘plnorm’
    grpintprob: no visible binding for global variable ‘pgamma’
    grpintprob: no visible binding for global variable ‘pweibull’
    grpintprob: no visible binding for global variable ‘pbinom’
    grpintprob: no visible binding for global variable ‘pnbinom’
    grpintprob: no visible binding for global variable ‘ppois’
    mix : mstep: no visible global function definition for ‘nlm’
    mix: no visible global function definition for ‘nlm’
    mix: no visible global function definition for ‘pchisq’
    mixgroup: no visible global function definition for ‘hist’
    plot.mix: no visible global function definition for ‘dnorm’
    plot.mix: no visible global function definition for ‘dlnorm’
    plot.mix: no visible global function definition for ‘dgamma’
    plot.mix: no visible global function definition for ‘dweibull’
    plot.mix: no visible global function definition for ‘dbinom’
    plot.mix: no visible global function definition for ‘dnbinom’
    plot.mix: no visible global function definition for ‘dpois’
    plot.mix: no visible global function definition for ‘plot’
    plot.mix: no visible global function definition for ‘title’
    plot.mix: no visible global function definition for ‘lines’
    plot.mix: no visible global function definition for ‘rect’
    plot.mix: no visible global function definition for ‘points’
    Undefined global functions or variables:
     dbinom dgamma dlnorm dnbinom dnorm dpois dweibull hist lines nlm
     pbinom pchisq pgamma plnorm plot pnbinom pnorm points ppois pweibull
     rect title var
    Consider adding
     importFrom("graphics", "hist", "lines", "plot", "points", "rect",
     "title")
     importFrom("stats", "dbinom", "dgamma", "dlnorm", "dnbinom", "dnorm",
     "dpois", "dweibull", "nlm", "pbinom", "pchisq", "pgamma",
     "plnorm", "pnbinom", "pnorm", "ppois", "pweibull", "var")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.5-4
Check: Rd line widths
Result: NOTE
    Rd file 'mix.Rd':
     \examples lines wider than 100 characters:
     fitbin1 <- mix(bindat, binpar, "binom", constr = mixconstr(consigma = "BINOM", size = c(20, 20, 20, 20)))
    
    Rd file 'plot.mix.Rd':
     \examples lines wider than 100 characters:
     fit2 <- mix(bindat, binpar, "binom", constr = mixconstr(consigma = "BINOM", size = c(20, 20, 20, 20)))
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.5-4
Check: examples
Result: ERROR
    Running examples in ‘mixdist-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: anova.mix
    > ### Title: ANOVA Tables for Mixture Model Objects
    > ### Aliases: anova.mix
    > ### Keywords: models
    >
    > ### ** Examples
    >
    > data(pike65) # load the grouped data `pike65'
    > data(pikepar) # load the initial values of parameters for the data `pike65'
    > fitpike3 <- mix(pike65, pikepar, "lnorm", mixconstr(conmu = "MFX",
    + fixmu = c(FALSE, FALSE, FALSE, FALSE, TRUE), consigma = "CCV"), emstep = 3)
    > anova(fitpike3)
    Error in UseMethod("anova") :
     no applicable method for 'anova' applied to an object of class "mix"
    Calls: anova
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64