An R implementation of an extension of the 'BayeScan' software (Foll, 2008) <doi:10.1534/genetics.108.092221> for codominant markers, adding the option to group individual SNPs into pre-defined blocks. A typical application of this new approach is the identification of genomic regions, genes, or gene sets containing one or more SNPs that evolved under directional selection.
| Version: | 1.3 |
| Depends: | R (≥ 2.14.2), BASIX |
| Imports: | methods |
| Suggests: | PopGenome |
| Published: | 2018-02-12 |
| Author: | Bastian Pfeifer |
| Maintainer: | Bastian Pfeifer <Bastian.Pfeifer at uni-duesseldorf.de> |
| License: | GPL-2 |
| NeedsCompilation: | yes |
| CRAN checks: | BlockFeST results |
| Reference manual: | BlockFeST.pdf |
| Vignettes: |
Input format |
| Package source: | BlockFeST_1.3.tar.gz |
| Windows binaries: | r-devel: BlockFeST_1.3.zip, r-release: BlockFeST_1.3.zip, r-oldrel: BlockFeST_1.3.zip |
| OS X binaries: | r-release: BlockFeST_1.3.tgz, r-oldrel: BlockFeST_1.3.tgz |
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