outbreaker: Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data

Bayesian reconstruction of disease outbreaks using epidemiological and genetic information.

Version: 1.1-8
Depends: R (≥ 3.0.0), parallel
Imports: utils, graphics, ape, igraph, adegenet
Published: 2017-08-17
Author: Thibaut Jombart, Anne Cori, Joel Hellewell
Maintainer: Thibaut Jombart <thibautjombart at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: http://sites.google.com/site/therepiproject/r-pac/outbreaker
NeedsCompilation: yes
SystemRequirements: gsl (>= 1.12)
Citation: outbreaker citation info
Materials: README ChangeLog
In views: Phylogenetics
CRAN checks: outbreaker results


Reference manual: outbreaker.pdf
Package source: outbreaker_1.1-8.tar.gz
Windows binaries: r-devel: outbreaker_1.1-8.zip, r-release: outbreaker_1.1-8.zip, r-oldrel: outbreaker_1.1-8.zip
OS X binaries: r-release: outbreaker_1.1-8.tgz, r-oldrel: outbreaker_1.1-8.tgz
Old sources: outbreaker archive


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