CRAN Package Check Results for Package hett

Last updated on 2018-05-14 01:46:43 CEST.

Check Details

Version: 0.3-1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     print.summary.tlm print.tlm print.tsum summary.tlm
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.3-1
Check: R code for possible problems
Result: NOTE
    print.tsum: warning in print.default(x$resid, digits = digits, na = "",
     print.gap = 2): partial argument match of ‘na’ to ‘na.print’
    print.tsum: no visible global function definition for ‘quantile’
    print.tsum: no visible global function definition for ‘printCoefmat’
    print.tsum: no visible global function definition for ‘symnum’
    tlm: no visible global function definition for ‘formula’
    tlm: no visible binding for global variable ‘na.fail’
    tlm: no visible global function definition for ‘model.matrix’
    tlm: no visible global function definition for ‘model.extract’
    tlm: no visible binding for global variable ‘response’
    tlm: no visible global function definition for ‘lm.fit’
    tlm: no visible global function definition for ‘coef’
    tlm: no visible global function definition for ‘resid’
    tlm: no visible global function definition for ‘Gamma’
    tlm: no visible binding for global variable ‘dofse’
    tlm: no visible binding for global variable ‘logLik’
    tscore: no visible global function definition for ‘model.extract’
    tscore: no visible binding for global variable ‘response’
    tscore : <anonymous>: no visible global function definition for
     ‘model.matrix’
    tscore: no visible global function definition for ‘resid’
    tscore: no visible global function definition for ‘pchisq’
    tscore: no visible global function definition for ‘printCoefmat’
    tsum: no visible global function definition for ‘pnorm’
    tsum: no visible global function definition for ‘pt’
    tsum: no visible global function definition for ‘residuals’
    Undefined global functions or variables:
     Gamma coef dofse formula lm.fit logLik model.extract model.matrix
     na.fail pchisq pnorm printCoefmat pt quantile resid residuals
     response symnum
    Consider adding
     importFrom("stats", "Gamma", "coef", "formula", "lm.fit", "logLik",
     "model.extract", "model.matrix", "na.fail", "pchisq",
     "pnorm", "printCoefmat", "pt", "quantile", "resid",
     "residuals", "symnum")
    to your NAMESPACE file.
    
    Found the following assignments to the global environment:
    File ‘hett/R/hett.R’:
     assign("data", data, envir = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.3-1
Check: examples
Result: ERROR
    Running examples in ‘hett-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: summary.tlm
    > ### Title: summary method for class "tlm"
    > ### Aliases: summary.tlm print.summary.tlm
    > ### Keywords: regression distribution
    >
    > ### ** Examples
    >
    >
    > data(mm, package = "hett")
    > attach(mm)
    >
    > ## fit a model with heteroscedasticity and estimating the degrees of freedom
    >
    > tfit2 <- tlm(m.marietta ~ CRSP, ~ CRSP, data = mm, start = list(dof =
    + 3), estDof = TRUE)
    > summary(tfit2)
    Error in if (object$family$family %in% c("poisson", "binomial")) 1 else if (df.r > :
     argument is of length zero
    Calls: summary -> summary.glm
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.3-1
Check: R code for possible problems
Result: NOTE
    print.tsum: warning in print.default(x$resid, digits = digits, na = "",
     print.gap = 2): partial argument match of 'na' to 'na.print'
    print.tsum: no visible global function definition for ‘quantile’
    print.tsum: no visible global function definition for ‘printCoefmat’
    print.tsum: no visible global function definition for ‘symnum’
    tlm: no visible global function definition for ‘formula’
    tlm: no visible binding for global variable ‘na.fail’
    tlm: no visible global function definition for ‘model.matrix’
    tlm: no visible global function definition for ‘model.extract’
    tlm: no visible binding for global variable ‘response’
    tlm: no visible global function definition for ‘lm.fit’
    tlm: no visible global function definition for ‘coef’
    tlm: no visible global function definition for ‘resid’
    tlm: no visible global function definition for ‘Gamma’
    tlm: no visible binding for global variable ‘dofse’
    tlm: no visible binding for global variable ‘logLik’
    tscore: no visible global function definition for ‘model.extract’
    tscore: no visible binding for global variable ‘response’
    tscore : <anonymous>: no visible global function definition for
     ‘model.matrix’
    tscore: no visible global function definition for ‘resid’
    tscore: no visible global function definition for ‘pchisq’
    tscore: no visible global function definition for ‘printCoefmat’
    tsum: no visible global function definition for ‘pnorm’
    tsum: no visible global function definition for ‘pt’
    tsum: no visible global function definition for ‘residuals’
    Undefined global functions or variables:
     Gamma coef dofse formula lm.fit logLik model.extract model.matrix
     na.fail pchisq pnorm printCoefmat pt quantile resid residuals
     response symnum
    Consider adding
     importFrom("stats", "Gamma", "coef", "formula", "lm.fit", "logLik",
     "model.extract", "model.matrix", "na.fail", "pchisq",
     "pnorm", "printCoefmat", "pt", "quantile", "resid",
     "residuals", "symnum")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64