Last updated on 2018-05-14 01:46:49 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0 | 1.70 | 24.48 | 26.18 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.0 | 1.66 | 21.26 | 22.92 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.0 | 34.21 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0 | 32.18 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 1.0 | 6.00 | 37.00 | 43.00 | NOTE | |
| r-patched-linux-x86_64 | 1.0 | 1.85 | 24.81 | 26.66 | NOTE | |
| r-patched-solaris-x86 | 1.0 | 52.30 | NOTE | |||
| r-release-linux-x86_64 | 1.0 | 1.60 | 24.80 | 26.40 | NOTE | |
| r-release-windows-ix86+x86_64 | 1.0 | 6.00 | 37.00 | 43.00 | NOTE | |
| r-release-osx-x86_64 | 1.0 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0 | 4.00 | 51.00 | 55.00 | NOTE | |
| r-oldrel-osx-x86_64 | 1.0 | NOTE |
Version: 1.0
Check: DESCRIPTION meta-information
Result: NOTE
Deprecated license: BSD
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 1.0
Check: top-level files
Result: NOTE
Non-standard file/directory found at top level:
‘sample’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.0
Check: dependencies in R code
Result: NOTE
'library' or 'require' call to ‘XML’ which was already attached by Depends.
Please remove these calls from your code.
Package in Depends field not imported from: ‘XML’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.0
Check: R code for possible problems
Result: NOTE
csv2list: no visible global function definition for ‘read.csv’
kgml_i: no visible global function definition for ‘xmlTreeParse’
kgml_i: no visible global function definition for ‘xmlRoot’
kgml_i: no visible global function definition for ‘xmlAttrs’
list2xml: no visible global function definition for ‘xmlNode’
list2xml: no visible global function definition for ‘append.xmlNode’
msea_ora: no visible global function definition for ‘fisher.test’
msea_ora: no visible global function definition for ‘p.adjust’
msea_sub: no visible global function definition for ‘sd’
msea_sub: no visible global function definition for ‘cor.test’
pathway_class: no visible global function definition for ‘untar’
pca_scaled: no visible binding for global variable ‘sd’
pca_scaled: no visible global function definition for ‘cor.test’
pca_scaled: no visible global function definition for ‘p.adjust’
pca_scaled: no visible binding for global variable ‘var’
read_pathway: no visible global function definition for ‘xmlTreeParse’
read_pathway: no visible global function definition for ‘xmlRoot’
read_pathway: no visible global function definition for ‘xmlToList’
read_pathway: no visible global function definition for ‘xmlAttrs’
Undefined global functions or variables:
append.xmlNode cor.test fisher.test p.adjust read.csv sd untar var
xmlAttrs xmlNode xmlRoot xmlToList xmlTreeParse
Consider adding
importFrom("stats", "cor.test", "fisher.test", "p.adjust", "sd", "var")
importFrom("utils", "read.csv", "untar")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64