Reads several formats of 13C data (IRIS/Wagner, BreathID) and CSV. Creates artificial sample data for testing. Fits Maes/Ghoos, Bluck-Coward self-correcting formula using 'nls', 'nlme'. See Bluck L J C and Coward W A 2006 <doi:10.1088/0967-3334/27/3/006>. Methods to fit breath test curves with Bayesian Stan methods are refactored to package 'breathteststan'. For a Shiny GUI, see package 'dmenne/breathtestshiny' on github.
| Version: | 0.4.1 |
| Depends: | R (≥ 3.4.0) |
| Imports: | nlme, MASS, stringr, dplyr, purrr, readr, tibble, methods, readxl, assertthat, broom, tidyr, ggplot2, ggfittext, signal, utils, multcomp, xml2 |
| Suggests: | testthat, covr, knitr, survival, gridExtra |
| Published: | 2018-04-25 |
| Author: | Dieter Menne [aut, cre], Menne Biomed Consulting Tuebingen [cph], Benjamin Misselwitz [fnd], Mark Fox [fnd], Andreas Steingoetter [dtc], University Hospital of Zurich, Dep. Gastroenterology [fnd, dtc] |
| Maintainer: | Dieter Menne <dieter.menne at menne-biomed.de> |
| BugReports: | https://github.com/dmenne/breathtestcore/issues |
| License: | GPL-3 |
| URL: | https://github.com/dmenne/breathtestcore |
| NeedsCompilation: | no |
| SystemRequirements: | pandoc |
| Materials: | README |
| CRAN checks: | breathtestcore results |
| Reference manual: | breathtestcore.pdf |
| Vignettes: |
Data formats Methods and concepts |
| Package source: | breathtestcore_0.4.1.tar.gz |
| Windows binaries: | r-devel: breathtestcore_0.4.1.zip, r-release: breathtestcore_0.4.1.zip, r-oldrel: breathtestcore_0.4.1.zip |
| OS X binaries: | r-release: breathtestcore_0.4.1.tgz, r-oldrel: breathtestcore_0.4.0.tgz |
| Old sources: | breathtestcore archive |
| Reverse suggests: | breathteststan |
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