CRAN Package Check Results for Package NAM

Last updated on 2018-06-20 01:50:23 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6 27.99 78.29 106.28 WARN
r-devel-linux-x86_64-debian-gcc 1.6 24.60 59.34 83.94 OK
r-devel-linux-x86_64-fedora-clang 1.6 130.71 ERROR
r-devel-linux-x86_64-fedora-gcc 1.6 123.16 ERROR
r-devel-windows-ix86+x86_64 1.6 62.00 136.00 198.00 OK
r-patched-linux-x86_64 1.6 30.63 76.36 106.99 OK
r-patched-solaris-x86 1.6 152.50 OK
r-release-linux-x86_64 1.6 28.98 75.94 104.92 OK
r-release-windows-ix86+x86_64 1.6 45.00 113.00 158.00 OK
r-release-osx-x86_64 1.6 OK
r-oldrel-windows-ix86+x86_64 1.6 58.00 117.00 175.00 OK
r-oldrel-osx-x86_64 1.6 OK

Additional issues

clang-ASAN gcc-ASAN

Check Details

Version: 1.6
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Functions.cpp:704:39: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
     Functions.cpp:704:66: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.6
Check: examples
Result: ERROR
    Running examples in ‘NAM-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: GWP
    > ### Title: Genome-wide prediction
    > ### Aliases: wgr ben
    >
    > ### ** Examples
    >
    > # Load data
    > data(tpod)
    >
    > # BLUP
    > BRR = wgr(y,gen,iv=FALSE,pi=0,it=200,bi=50)
    > cor(y,BRR$hat)
     [,1]
    [1,] 0.6981897
    >
    > # BayesA
    > BayesA = wgr(y,gen,iv=TRUE,pi=0,it=200,bi=50)
    > cor(y,BayesA$hat)
     [,1]
    [1,] 0.6919416
    >
    > # BayesB
    > BayesB = wgr(y,gen,iv=TRUE,pi=.95,it=200,bi=50)
    > cor(y,BayesB$hat)
     [,1]
    [1,] 0.5915633
    >
    > # BayesC
    > BayesC = wgr(y,gen,iv=FALSE,pi=.95,it=200,bi=50)
    > cor(y,BayesC$hat)
     [,1]
    [1,] 0.476323
    >
    > # BayesL
    > BayesL = wgr(y,gen,de=TRUE,it=200,bi=50)
    > cor(y,BayesL$hat)
     [,1]
    [1,] 0.6656239
    >
    > # Bagging BLUP
    > Bag = wgr(y,gen,bag=0.999,it=200,bi=50)
    Error in crossprod(x, y) :
     requires numeric/complex matrix/vector arguments
    Calls: wgr -> crossprod
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc