CRAN Package Check Results for Package biglm

Last updated on 2018-06-20 01:50:05 CEST.

Check Details

Version: 0.9-1
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.9-1
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘test’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.9-1
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘DBI’ ‘methods’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.9-1
Check: foreign function calls
Result: NOTE
    Call with DUP:
     .Fortran("regcf", as.integer(p), as.integer(p * p/2), bigQR$D,
     bigQR$rbar, bigQR$thetab, bigQR$tol, beta = numeric(p), nreq = as.integer(nvar),
     ier = integer(1), DUP = FALSE)
    DUP is no longer supported and will be ignored.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.9-1
Check: R code for possible problems
Result: NOTE
    bigglm.RODBC: no visible global function definition for ‘odbcQuery’
    bigglm.RODBC : chunk: no visible global function definition for
     ‘odbcQuery’
    bigglm.RODBC : chunk: no visible global function definition for
     ‘sqlGetResults’
    bigglm,ANY-DBIConnection: no visible global function definition for
     ‘dbSendQuery’
    bigglm,ANY-DBIConnection: no visible global function definition for
     ‘dbClearResult’
    bigglm,ANY-DBIConnection : chunk: no visible global function definition
     for ‘dbClearResult’
    bigglm,ANY-DBIConnection : chunk: no visible global function definition
     for ‘dbSendQuery’
    bigglm,ANY-DBIConnection : chunk: no visible global function definition
     for ‘fetch’
    Undefined global functions or variables:
     dbClearResult dbSendQuery fetch odbcQuery sqlGetResults
    
    Found the following calls to data() loading into the global environment:
    File ‘biglm/R/bigglm.R’:
     data(reset = TRUE)
     data(reset = FALSE)
    See section ‘Good practice’ in ‘?data’.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.9-1
Check: compiled code
Result: NOTE
    File ‘biglm/libs/biglm.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.9-1
Check: R code for possible problems
Result: NOTE
    bigglm.RODBC: no visible global function definition for ‘odbcQuery’
    bigglm.RODBC : chunk: no visible global function definition for
     ‘odbcQuery’
    bigglm.RODBC : chunk: no visible global function definition for
     ‘sqlGetResults’
    bigglm,ANY-DBIConnection: no visible global function definition for
     ‘dbSendQuery’
    bigglm,ANY-DBIConnection: no visible global function definition for
     ‘dbClearResult’
    bigglm,ANY-DBIConnection : chunk: no visible global function definition
     for ‘dbClearResult’
    bigglm,ANY-DBIConnection : chunk: no visible global function definition
     for ‘dbSendQuery’
    bigglm,ANY-DBIConnection : chunk: no visible global function definition
     for ‘fetch’
    Undefined global functions or variables:
     dbClearResult dbSendQuery fetch odbcQuery sqlGetResults
Flavors: r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.9-1
Check: examples
Result: ERROR
    Running examples in ‘biglm-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: bigglm
    > ### Title: Bounded memory linear regression
    > ### Aliases: bigglm bigglm.function bigglm.data.frame
    > ### bigglm.SQLiteConnection bigglm.RODBC vcov.bigglm deviance.bigglm
    > ### family.bigglm AIC.bigglm bigglm,ANY,DBIConnection-method
    > ### Keywords: regression
    >
    > ### ** Examples
    >
    > data(trees)
    > ff<-log(Volume)~log(Girth)+log(Height)
    > a <- bigglm(ff,data=trees, chunksize=10, sandwich=TRUE)
    Error in UseMethod("bigglm", data) :
     no applicable method for 'bigglm' applied to an object of class "data.frame"
    Calls: bigglm -> bigglm
    Execution halted
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.9-1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘RODBC’
Flavor: r-oldrel-osx-x86_64