A set of utilities for querying 'HaploReg' <http://archive.broadinstitute.org/mammals/haploreg/haploreg.php> and 'RegulomeDB' <http://www.regulomedb.org> web-based tools. The package connects to 'HaploReg' or 'RegulomeDB', searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.
Version: | 1.6.4 |
Depends: | R (≥ 3.3.2) |
Imports: | httr, XML, tibble, RUnit, plyr |
Suggests: | knitr, rmarkdown, openxlsx |
Published: | 2018-05-23 |
Author: | Ilya Y. Zhbannikov [aut, cre] |
Maintainer: | Ilya Y. Zhbannikov <ilya.zhbannikov at duke.edu> |
License: | GPL-3 |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | haploR results |
Reference manual: | haploR.pdf |
Vignettes: |
Tutorial for haploR package |
Package source: | haploR_1.6.4.tar.gz |
Windows binaries: | r-devel: haploR_1.6.4.zip, r-release: haploR_1.6.4.zip, r-oldrel: haploR_1.6.4.zip |
OS X binaries: | r-release: haploR_1.6.4.tgz, r-oldrel: haploR_1.6.4.tgz |
Old sources: | haploR archive |
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