toxplot: Batch Processing, Modeling and Visualizing the Dose-Response of High-Throughput Screening Bioassay

A convenient interface to batch process high-throughput toxicology bioassay screening data. It's designed specifically for screening experiment that features a primary inhibition-type assay and a companion cytotoxicity assay. This package provides functions for data normalization, quality-control analysis, dose-response curve fitting (using the Hill model provided in the 'tcpl' package), visualization, and a unique toxicity-adjusted potency ranking system.

Version: 0.1.1
Depends: R (≥ 3.3.0)
Imports: dplyr (≥ 0.5.0), tidyr (≥ 0.5.0), tcpl (≥ 1.0.0), ggplot2 (≥ 2.2.0), ggthemes (≥ 3.4.0)
Suggests: knitr, rmarkdown, testthat, plotly, devtools
Published: 2018-04-03
Author: Jun Wang
Maintainer: Jun Wang <njekin at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: toxplot results


Reference manual: toxplot.pdf
Package source: toxplot_0.1.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X binaries: r-release: toxplot_0.1.1.tgz, r-oldrel: toxplot_0.1.1.tgz
Old sources: toxplot archive


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