Implements a predictive model of community assembly called 'Traitspace' (Laughlin et al. 2012, Ecology Letters). Traitspace is a hierarchical Bayesian model that translates the theory of trait-based environmental filtering into a statistical model that incorporates intraspecific trait variation to predict the relative abundances and the distributions of species. The package includes functions to plot the predicted and the observed values. It also includes functions to compare the predicted values against the observed values using a variety of different distance measures and to implement permutation tests to test their statistical significance.
| Version: | 1.1 |
| Depends: | permute, mclust, graphics, grDevices, stats, utils |
| Published: | 2015-11-18 |
| Author: | Chaitanya Joshi, Xin Li, Daniel Laughlin |
| Maintainer: | Chaitanya Joshi <cjoshi at waikato.ac.nz> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| CRAN checks: | Traitspace results |
| Reference manual: | Traitspace.pdf |
| Package source: | Traitspace_1.1.tar.gz |
| Windows binaries: | r-devel: Traitspace_1.1.zip, r-release: Traitspace_1.1.zip, r-oldrel: Traitspace_1.1.zip |
| OS X binaries: | r-release: Traitspace_1.1.tgz, r-oldrel: Traitspace_1.1.tgz |
| Old sources: | Traitspace archive |
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