Construct consensus genetic maps with LPmerge, see Endelman and Plomion (2014) <doi:10.1093/bioinformatics/btu091> and model the relationship between physical distance and genetic distance using thin-plate regression splines, see Wood (2003) <doi:10.1111/1467-9868.00374>. Perform quality control on input data and visualise intermediate steps.
| Version: | 0.1.2 |
| Depends: | igraph |
| Imports: | dplyr, ggplot2, mgcv, doParallel, parallel, foreach, stringi, plotly, visNetwork, LPmerge, lazyeval, tidyr |
| Suggests: | knitr, rmarkdown |
| Published: | 2017-10-10 |
| Author: | Dennis van Muijen, Ram Kumar Basnet, Nathalie J. Dek |
| Maintainer: | Dennis van Muijen <d.van.muijen at rijkzwaan.nl> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| CRAN checks: | mapfuser results |
| Reference manual: | mapfuser.pdf |
| Vignettes: |
Working with the MapFuser package |
| Package source: | mapfuser_0.1.2.tar.gz |
| Windows binaries: | r-devel: mapfuser_0.1.2.zip, r-release: mapfuser_0.1.2.zip, r-oldrel: mapfuser_0.1.2.zip |
| OS X binaries: | r-release: mapfuser_0.1.2.tgz, r-oldrel: mapfuser_0.1.2.tgz |
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