CRAN Package Check Results for Package demi

Last updated on 2018-10-19 01:46:17 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.2 6.05 56.67 62.72 NOTE
r-devel-linux-x86_64-debian-gcc 1.1.2 6.94 45.79 52.73 NOTE
r-devel-linux-x86_64-fedora-clang 1.1.2 78.79 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1.2 81.29 NOTE
r-devel-windows-ix86+x86_64 1.1.2 16.00 95.00 111.00 NOTE
r-patched-linux-x86_64 1.1.2 5.28 51.49 56.77 NOTE
r-patched-solaris-x86 1.1.2 94.10 NOTE
r-release-linux-x86_64 1.1.2 4.99 52.39 57.38 NOTE
r-release-windows-ix86+x86_64 1.1.2 13.00 95.00 108.00 NOTE
r-release-osx-x86_64 1.1.2 NOTE
r-oldrel-windows-ix86+x86_64 1.1.2 6.00 96.00 102.00 NOTE
r-oldrel-osx-x86_64 1.1.2 NOTE

Check Details

Version: 1.1.2
Check: R code for possible problems
Result: NOTE
    DEMIPathway: no visible global function definition for ‘dhyper’
    DEMIPathway: no visible global function definition for ‘p.adjust’
    calcHypergeoExon: no visible global function definition for ‘dhyper’
    calcHypergeoProb: no visible global function definition for ‘dhyper’
    demi: no visible global function definition for ‘write.table’
    demi.t.test: no visible global function definition for ‘t.test’
    demi.wilcox.test: no visible global function definition for
     ‘wilcox.test’
    demi.wilcox.test.fast: no visible global function definition for
     ‘wilcox.test’
    demiequal: no visible global function definition for ‘wilcox.test’
    wprob: no visible global function definition for ‘combn’
    diffexp,DEMIDiff: no visible global function definition for ‘median’
    diffexp,DEMIDiff: no visible global function definition for ‘p.adjust’
    loadAnnotation,DEMIExperiment-environment: no visible global function
     definition for ‘data’
    loadBlat,DEMIExperiment-environment: no visible global function
     definition for ‘data’
    loadCytoband,DEMIExperiment-environment: no visible global function
     definition for ‘data’
    loadPathway,DEMIExperiment-environment: no visible global function
     definition for ‘data’
    Undefined global functions or variables:
     combn data dhyper median p.adjust t.test wilcox.test write.table
    Consider adding
     importFrom("stats", "dhyper", "median", "p.adjust", "t.test",
     "wilcox.test")
     importFrom("utils", "combn", "data", "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64