A Bayesian feature allocation model is implemented for inference on tumor heterogeneity using next-generation sequencing data. The model identifies the subclonal copy number and single nucleotide mutations at a selected set of loci and provides inference on genetic tumor variation.
| Version: | 1.1 |
| Depends: | R (≥ 2.0.1), combinat |
| Published: | 2014-12-24 |
| Author: | Juhee Lee, Peter Mueller, Subhajit Sengupta, Kamalakar Gulukota, Yuan Ji |
| Maintainer: | Subhajit Sengupta <subhajit06 at gmail.com> |
| License: | GPL-3 | file LICENSE |
| NeedsCompilation: | yes |
| CRAN checks: | BayClone2 results |
| Reference manual: | BayClone2.pdf |
| Package source: | BayClone2_1.1.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| OS X binaries: | r-release: BayClone2_1.1.tgz, r-oldrel: BayClone2_1.1.tgz |
| Old sources: | BayClone2 archive |
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