Generates knockoff variables from discrete Markov chains and hidden Markov models, with specific support for genetic data. For more information, see the website below and the accompanying paper: Sesia et al., "Gene Hunting with Knockoffs for Hidden Markov Models", 2017, <arXiv:1706.04677>.
| Version: | 0.7.1 |
| Depends: | R (≥ 3.3.0) |
| Imports: | Rcpp (≥ 0.12.13) |
| LinkingTo: | Rcpp, RcppProgress |
| Suggests: | knitr, testthat, parallel, doParallel |
| Published: | 2018-05-30 |
| Author: | Matteo Sesia |
| Maintainer: | Matteo Sesia <msesia at stanford.edu> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://web.stanford.edu/group/candes/knockoffs/software/snpknock/ |
| NeedsCompilation: | yes |
| Materials: | NEWS |
| CRAN checks: | SNPknock results |
| Reference manual: | SNPknock.pdf |
| Vignettes: |
Using SNPknock in R Using SNPknock with Genetic Data |
| Package source: | SNPknock_0.7.1.tar.gz |
| Windows binaries: | r-devel: SNPknock_0.7.1.zip, r-release: SNPknock_0.7.1.zip, r-oldrel: SNPknock_0.7.1.zip |
| OS X binaries: | r-release: SNPknock_0.7.1.tgz, r-oldrel: SNPknock_0.7.1.tgz |
| Old sources: | SNPknock archive |
Please use the canonical form https://CRAN.R-project.org/package=SNPknock to link to this page.