haploR: Query 'HaploReg', 'RegulomeDB', 'LDlink'

A set of utilities for querying 'HaploReg' <http://archive.broadinstitute.org/mammals/haploreg/haploreg.php>, 'RegulomeDB' <http://www.regulomedb.org>, and LDlink <https://analysistools.nci.nih.gov/LDlink> web-based tools. The package connects to 'HaploReg', 'RegulomeDB' and 'LDlink', searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.

Version: 2.0.6
Depends: R (≥ 3.4.0)
Imports: httr, XML, tibble, RUnit, plyr, DT
Suggests: knitr, rmarkdown, openxlsx
Published: 2018-08-17
Author: Ilya Y. Zhbannikov [aut, cre], Konstantin G. Arbeev [aut], Anatoliy I. Yashin [aut]
Maintainer: Ilya Y. Zhbannikov <ilya.zhbannikov at duke.edu>
License: GPL-3
NeedsCompilation: no
Materials: README NEWS
CRAN checks: haploR results


Reference manual: haploR.pdf
Vignettes: Tutorial for haploR package
Package source: haploR_2.0.6.tar.gz
Windows binaries: r-devel: haploR_2.0.6.zip, r-release: haploR_2.0.6.zip, r-oldrel: haploR_2.0.6.zip
OS X binaries: r-release: haploR_2.0.6.tgz, r-oldrel: haploR_2.0.6.tgz
Old sources: haploR archive


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