CRAN Package Check Results for Package NMF

Last updated on 2018-11-24 00:51:16 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.21.0 24.49 124.17 148.66 OK --no-examples --no-tests --no-vignettes
r-devel-linux-x86_64-debian-gcc 0.21.0 16.98 96.33 113.31 OK --no-examples --no-tests --no-vignettes
r-devel-linux-x86_64-fedora-clang 0.21.0 669.52 OK
r-devel-linux-x86_64-fedora-gcc 0.21.0 667.87 OK
r-devel-windows-ix86+x86_64 0.21.0 57.00 800.00 857.00 OK
r-patched-linux-x86_64 0.21.0 18.32 117.66 135.98 OK --no-examples --no-tests --no-vignettes
r-patched-solaris-x86 0.21.0 235.10 ERROR --no-build-vignettes
r-release-linux-x86_64 0.21.0 20.16 117.81 137.97 OK --no-examples --no-tests --no-vignettes
r-release-windows-ix86+x86_64 0.21.0 56.00 834.00 890.00 OK
r-release-osx-x86_64 0.21.0 NOTE
r-oldrel-windows-ix86+x86_64 0.21.0 43.00 896.00 939.00 OK
r-oldrel-osx-x86_64 0.21.0 NOTE

Check Details

Version: 0.21.0
Flags: --no-build-vignettes
Check: examples
Result: ERROR
    Running examples in ‘NMF-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: NMFfitX-class
    > ### Title: Virtual Class to Handle Results from Multiple Runs of NMF
    > ### Algorithms
    > ### Aliases: NMFfitX-class
    >
    > ### ** Examples
    >
    > ## Don't show:
    > # roxygen generated flag
    > options(R_CHECK_RUNNING_EXAMPLES_=TRUE)
    > ## End(Don't show)
    >
    > # generate a synthetic dataset with known classes
    > n <- 20; counts <- c(5, 2, 3);
    > V <- syntheticNMF(n, counts)
    >
    > # perform multiple runs of one algorithm (default is to keep only best fit)
    > res <- nmf(V, 3, nrun=3)
    # NOTE - CRAN check detected: limiting maximum number of cores [2/16]
    Error in big.matrix(nrow = nrow(x), ncol = ncol(x), type = type, init = NULL, :
     Error: memory could not be allocated for instance of type big.matrix
    Calls: nmf ... gVariable -> <Anonymous> -> <Anonymous> -> big.matrix
    Timing stopped at: 0.029 0.037 0.092
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.21.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘doMPI’
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64