lilikoi: Metabolomics Personalized Pathway Analysis Tool

Computes the pathway deregulation score for a given set of metabolites, selects the pathways with the highest mutual information and then uses them to build a classifier. F. Alakwaa, S. Huang, and L. Garmire (2018) <doi:10.1101/283408>.

Version: 0.1.0
Depends: R (≥ 3.4.0)
Imports: caret, corrplot, devtools, dplyr, e1071, gbm, ggplot2, glmnet, hash, Hmisc, infotheo, Matrix, pamr, R.oo, princurve, pROC, randomForest, reshape2, RWeka, stringr
Suggests: testthat
Published: 2018-07-30
Author: Fadhl Alakwaa [aut, cre], Sijia Huang [aut]
Maintainer: Fadhl Alakwaa <falakwaa at>
License: GPL-2
NeedsCompilation: no
Materials: README NEWS
CRAN checks: lilikoi results


Reference manual: lilikoi.pdf
Package source: lilikoi_0.1.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X binaries: r-release: lilikoi_0.1.0.tgz, r-oldrel: lilikoi_0.1.0.tgz


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