pcr: Analyzing Real-Time Quantitative PCR Data

Calculates the amplification efficiency and curves from real-time quantitative PCR (Polymerase Chain Reaction) data. Estimates the relative expression from PCR data using the double delta CT and the standard curve methods Livak & Schmittgen (2001) <doi:10.1006/meth.2001.1262>. Tests for statistical significance using two-group tests and linear regression Yuan et al. (2006) <doi:10.1186/1471-2105-7-85>.

Version: 1.1.2
Depends: R (≥ 3.4.0)
Imports: devtools, magrittr, dplyr, tidyr, purrr, readr, ggplot2
Suggests: testthat, knitr, rmarkdown, covr, cowplot
Published: 2018-07-24
Author: Mahmoud Ahmed [aut, cre]
Maintainer: Mahmoud Ahmed <mahmoud.s.fahmy at students.kasralainy.edu.eg>
BugReports: https://github.com/MahShaaban/pcr/issues
License: GPL-3
URL: https://github.com/MahShaaban/pcr
NeedsCompilation: no
Materials: README NEWS
CRAN checks: pcr results


Reference manual: pcr.pdf
Vignettes: Analysis of real-time qPCR data
Package source: pcr_1.1.2.tar.gz
Windows binaries: r-devel: pcr_1.1.2.zip, r-release: pcr_1.1.2.zip, r-oldrel: pcr_1.1.2.zip
OS X binaries: r-release: pcr_1.1.2.tgz, r-oldrel: pcr_1.1.2.tgz
Old sources: pcr archive


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