CRAN Package Check Results for Package cooccurNet

Last updated on 2019-01-19 00:46:20 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.6 4.04 74.28 78.32 OK
r-devel-linux-x86_64-debian-gcc 0.1.6 2.64 56.64 59.28 OK
r-devel-linux-x86_64-fedora-clang 0.1.6 89.76 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1.6 82.70 NOTE
r-devel-windows-ix86+x86_64 0.1.6 8.00 109.00 117.00 ERROR
r-patched-linux-x86_64 0.1.6 2.66 68.67 71.33 OK
r-patched-solaris-x86 0.1.6 71.40 ERROR
r-release-linux-x86_64 0.1.6 2.33 67.51 69.84 OK
r-release-windows-ix86+x86_64 0.1.6 7.00 84.00 91.00 ERROR
r-release-osx-x86_64 0.1.6 NOTE
r-oldrel-windows-ix86+x86_64 0.1.6 6.00 84.00 90.00 ERROR
r-oldrel-osx-x86_64 0.1.6 NOTE

Check Details

Version: 0.1.6
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘knitr’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.6
Check: examples
Result: ERROR
    Running examples in 'cooccurNet-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: coocnet
    > ### Title: coocnet
    > ### Aliases: coocnet
    >
    > ### ** Examples
    >
    > cooccurNetwork = coocnet(dataFile=getexample(dataType="protein"), dataType="protein")
    reading file......
    completed. (10,329)
    preprocess file......
    Calculating bigram frequency ......
    
    This application has requested the Runtime to terminate it in an unusual way.
    Please contact the application's support team for more information.
    terminate called after throwing an instance of 'boost::interprocess::interprocess_exception'
     what(): Zugriff verweigert
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.6
Check: examples
Result: ERROR
    Running examples in ‘cooccurNet-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: coocnet
    > ### Title: coocnet
    > ### Aliases: coocnet
    >
    > ### ** Examples
    >
    > cooccurNetwork = coocnet(dataFile=getexample(dataType="protein"), dataType="protein")
    reading file......
    completed. (10,329)
    preprocess file......Error in if (pred >= memsize * alpha || ncol > 150 || (nrow > 30000 & :
     missing value where TRUE/FALSE needed
    Calls: coocnet ... cooccur.dataprepreprocess.preprocess -> inmemoryflag
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.1.6
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
    Quitting from lines 176-178 (Extending-cooccurNet.Rmd)
    Error: processing vignette 'Extending-cooccurNet.Rmd' failed with diagnostics:
    missing value where TRUE/FALSE needed
    Execution halted
Flavor: r-patched-solaris-x86