CRAN Package Check Results for Package dataone

Last updated on 2019-01-19 00:46:21 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1.1 8.38 113.62 122.00 ERROR
r-devel-linux-x86_64-debian-gcc 2.1.1 8.20 88.33 96.53 ERROR
r-devel-linux-x86_64-fedora-clang 2.1.1 151.38 ERROR
r-devel-linux-x86_64-fedora-gcc 2.1.1 143.63 ERROR
r-devel-windows-ix86+x86_64 2.1.1 24.00 331.00 355.00 ERROR
r-patched-linux-x86_64 2.1.1 9.98 136.60 146.58 ERROR
r-patched-solaris-x86 2.1.1 177.00 ERROR
r-release-linux-x86_64 2.1.1 9.64 134.14 143.78 ERROR
r-release-windows-ix86+x86_64 2.1.1 23.00 314.00 337.00 ERROR
r-release-osx-x86_64 2.1.1 OK
r-oldrel-windows-ix86+x86_64 2.1.1 22.00 230.00 252.00 ERROR
r-oldrel-osx-x86_64 2.1.1 OK

Check Details

Version: 2.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [30s/106s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > test_check("dataone")
     Loading required package: dataone
     ── 1. Error: D1Client downloadObject (@test.D1Client.R#548) ───────────────────
     trying to get slot "obsoletedBy" from an object of a basic class ("NULL") with no slots
     1: downloadObject(d1cKNB, pid, path) at testthat/test.D1Client.R:548
     2: downloadObject(d1cKNB, pid, path)
     3: .local(x, identifier, ...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 200 SKIPPED: 37 FAILED: 1
     1. Error: D1Client downloadObject (@test.D1Client.R#548)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 2.1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    duplicated vignette title:
     ‘Uploading Data to DataONE’
    
    --- re-building ‘dataone-federation.Rmd’ using rmarkdown
    --- finished re-building ‘dataone-federation.Rmd’
    
    --- re-building ‘dataone-overview.Rmd’ using rmarkdown
    --- finished re-building ‘dataone-overview.Rmd’
    
    --- re-building ‘download-data.Rmd’ using rmarkdown
    --- finished re-building ‘download-data.Rmd’
    
    --- re-building ‘known-issues.Rmd’ using rmarkdown
    --- finished re-building ‘known-issues.Rmd’
    
    --- re-building ‘searching-dataone.Rmd’ using rmarkdown
    --- finished re-building ‘searching-dataone.Rmd’
    
    --- re-building ‘update-package.Rmd’ using rmarkdown
    --- finished re-building ‘update-package.Rmd’
    
    --- re-building ‘upload-data.Rmd’ using rmarkdown
    --- finished re-building ‘upload-data.Rmd’
    
    Error: Duplicate vignette titles.
     Ensure that the %\VignetteIndexEntry lines in the vignette sources
     correspond to the vignette titles.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 2.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [22s/79s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > test_check("dataone")
     Loading required package: dataone
     ── 1. Error: D1Client downloadObject (@test.D1Client.R#548) ───────────────────
     trying to get slot "obsoletedBy" from an object of a basic class ("NULL") with no slots
     1: downloadObject(d1cKNB, pid, path) at testthat/test.D1Client.R:548
     2: downloadObject(d1cKNB, pid, path)
     3: .local(x, identifier, ...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 200 SKIPPED: 37 FAILED: 1
     1. Error: D1Client downloadObject (@test.D1Client.R#548)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [35s/88s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > test_check("dataone")
     Loading required package: dataone
     ── 1. Error: D1Client downloadObject (@test.D1Client.R#548) ───────────────────
     trying to get slot "obsoletedBy" from an object of a basic class ("NULL") with no slots
     1: downloadObject(d1cKNB, pid, path) at testthat/test.D1Client.R:548
     2: downloadObject(d1cKNB, pid, path)
     3: .local(x, identifier, ...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 200 SKIPPED: 37 FAILED: 1
     1. Error: D1Client downloadObject (@test.D1Client.R#548)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 2.1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    duplicated vignette title:
     ‘Uploading Data to DataONE’
    
    --- re-building ‘dataone-federation.Rmd’ using rmarkdown
    --- finished re-building ‘dataone-federation.Rmd’
    
    --- re-building ‘dataone-overview.Rmd’ using rmarkdown
    --- finished re-building ‘dataone-overview.Rmd’
    
    --- re-building ‘download-data.Rmd’ using rmarkdown
    --- finished re-building ‘download-data.Rmd’
    
    --- re-building ‘known-issues.Rmd’ using rmarkdown
    --- finished re-building ‘known-issues.Rmd’
    
    --- re-building ‘searching-dataone.Rmd’ using rmarkdown
    --- finished re-building ‘searching-dataone.Rmd’
    
    --- re-building ‘update-package.Rmd’ using rmarkdown
    --- finished re-building ‘update-package.Rmd’
    
    --- re-building ‘upload-data.Rmd’ using rmarkdown
    --- finished re-building ‘upload-data.Rmd’
    
    Error: Duplicate vignette titles.
     Ensure that the %\VignetteIndexEntry lines in the vignette sources
     correspond to the vignette titles.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 2.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [32s/97s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > test_check("dataone")
     Loading required package: dataone
     ── 1. Error: D1Client downloadObject (@test.D1Client.R#548) ───────────────────
     trying to get slot "obsoletedBy" from an object of a basic class ("NULL") with no slots
     1: downloadObject(d1cKNB, pid, path) at testthat/test.D1Client.R:548
     2: downloadObject(d1cKNB, pid, path)
     3: .local(x, identifier, ...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 200 SKIPPED: 37 FAILED: 1
     1. Error: D1Client downloadObject (@test.D1Client.R#548)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 2.1.1
Check: tests
Result: ERROR
     Running 'testthat.R' [147s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > test_check("dataone")
     Loading required package: dataone
     -- 1. Error: D1Client downloadObject (@test.D1Client.R#548) -------------------
     trying to get slot "obsoletedBy" from an object of a basic class ("NULL") with no slots
     1: downloadObject(d1cKNB, pid, path) at testthat/test.D1Client.R:548
     2: downloadObject(d1cKNB, pid, path)
     3: .local(x, identifier, ...)
    
     == testthat results ===========================================================
     OK: 200 SKIPPED: 37 FAILED: 1
     1. Error: D1Client downloadObject (@test.D1Client.R#548)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 2.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [58s/173s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > test_check("dataone")
     Loading required package: dataone
     ── 1. Error: D1Client downloadObject (@test.D1Client.R#548) ───────────────────
     trying to get slot "obsoletedBy" from an object of a basic class ("NULL") with no slots
     1: downloadObject(d1cKNB, pid, path) at testthat/test.D1Client.R:548
     2: downloadObject(d1cKNB, pid, path)
     3: .local(x, identifier, ...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 200 SKIPPED: 37 FAILED: 1
     1. Error: D1Client downloadObject (@test.D1Client.R#548)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 2.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [89s/200s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > test_check("dataone")
     Loading required package: dataone
     ── 1. Error: D1Client getDataObject (@test.D1Client.R#99) ─────────────────────
     Timeout was reached: Operation timed out after 10002 milliseconds with 0 out of 0 bytes received
     1: getDataObject(d1cKNB, pid) at testthat/test.D1Client.R:99
     2: getDataObject(d1cKNB, pid)
     3: .local(x, identifier, ...)
     4: getSystemMetadata(currentMN, identifier)
     5: getSystemMetadata(currentMN, identifier)
     6: .local(x, ...)
     7: auth_get(url, node = x)
     8: GET(url, config = nconfig, user_agent(get_user_agent()), write_path)
     9: request_perform(req, hu$handle$handle)
     10: request_fetch(req$output, req$url, handle)
     11: request_fetch.write_memory(req$output, req$url, handle)
     12: curl::curl_fetch_memory(url, handle = handle)
    
     ── 2. Error: D1Client downloadObject (@test.D1Client.R#548) ───────────────────
     trying to get slot "obsoletedBy" from an object of a basic class ("NULL") with no slots
     1: downloadObject(d1cKNB, pid, path) at testthat/test.D1Client.R:548
     2: downloadObject(d1cKNB, pid, path)
     3: .local(x, identifier, ...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 195 SKIPPED: 37 FAILED: 2
     1. Error: D1Client getDataObject (@test.D1Client.R#99)
     2. Error: D1Client downloadObject (@test.D1Client.R#548)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86

Version: 2.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [57s/160s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > test_check("dataone")
     Loading required package: dataone
     ── 1. Error: D1Client downloadObject (@test.D1Client.R#548) ───────────────────
     trying to get slot "obsoletedBy" from an object of a basic class ("NULL") with no slots
     1: downloadObject(d1cKNB, pid, path) at testthat/test.D1Client.R:548
     2: downloadObject(d1cKNB, pid, path)
     3: .local(x, identifier, ...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 200 SKIPPED: 37 FAILED: 1
     1. Error: D1Client downloadObject (@test.D1Client.R#548)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-linux-x86_64

Version: 2.1.1
Check: tests
Result: ERROR
     Running 'testthat.R' [152s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > test_check("dataone")
     Loading required package: dataone
     -- 1. Error: D1Client downloadObject (@test.D1Client.R#548) -------------------
     trying to get slot "obsoletedBy" from an object of a basic class ("NULL") with no slots
     1: downloadObject(d1cKNB, pid, path) at testthat/test.D1Client.R:548
     2: downloadObject(d1cKNB, pid, path)
     3: .local(x, identifier, ...)
    
     == testthat results ===========================================================
     OK: 200 SKIPPED: 37 FAILED: 1
     1. Error: D1Client downloadObject (@test.D1Client.R#548)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-windows-ix86+x86_64

Version: 2.1.1
Check: tests
Result: ERROR
     Running 'testthat.R' [90s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > test_check("dataone")
     Loading required package: dataone
     -- 1. Error: D1Client downloadObject (@test.D1Client.R#548) -------------------
     trying to get slot "obsoletedBy" from an object of a basic class ("NULL") with no slots
     1: downloadObject(d1cKNB, pid, path) at testthat/test.D1Client.R:548
     2: downloadObject(d1cKNB, pid, path)
     3: .local(x, identifier, ...)
    
     == testthat results ===========================================================
     OK: 200 SKIPPED: 37 FAILED: 1
     1. Error: D1Client downloadObject (@test.D1Client.R#548)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64