Last updated on 2019-01-19 00:46:37 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 3.0.2 | 20.24 | 343.85 | 364.09 | OK | --no-vignettes |
| r-devel-linux-x86_64-debian-gcc | 3.0.2 | 16.78 | 267.19 | 283.97 | OK | --no-vignettes |
| r-devel-linux-x86_64-fedora-clang | 3.0.2 | 840.69 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 3.0.2 | 783.89 | OK | |||
| r-devel-windows-ix86+x86_64 | 3.0.2 | 50.00 | 345.00 | 395.00 | ERROR | --no-vignettes |
| r-patched-linux-x86_64 | 3.0.2 | 17.50 | 324.49 | 341.99 | OK | --no-vignettes |
| r-patched-solaris-x86 | 3.0.2 | 552.70 | OK | --no-vignettes | ||
| r-release-linux-x86_64 | 3.0.2 | 19.51 | 323.16 | 342.67 | OK | --no-vignettes |
| r-release-windows-ix86+x86_64 | 3.0.2 | 48.00 | 449.00 | 497.00 | OK | --no-vignettes |
| r-release-osx-x86_64 | 3.0.2 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 3.0.2 | 38.00 | 335.00 | 373.00 | OK | --no-vignettes |
| r-oldrel-osx-x86_64 | 3.0.2 | FAIL |
Version: 3.0.2
Flags: --no-vignettes
Check: examples
Result: ERROR
Running examples in 'phylosim-Ex.R' failed
The error most likely occurred in:
> ### Name: getLogLevel.PhyloSim
> ### Title: Get the log level from a PhyloSim object
> ### Aliases: getLogLevel.PhyloSim PhyloSim.getLogLevel
> ### getLogLevel,PhyloSim-method
>
> ### ** Examples
>
> # Create a PhyloSim object
> sim<-PhyloSim();
> # get/set log level
> getLogLevel(sim)
[1] -1
> setLogLevel(sim,0)
[1] 0
> # set/get log level via virtual field
> sim$logLevel<- -1
> sim$logLevel
[1] -1
> # clean up
> unlink(sim$logFile)
>
>
>
> cleanEx()
Error: connections left open:
PhyloSim_Anonymous_268004312.log (file)
Execution halted
Flavor: r-devel-windows-ix86+x86_64
Version: 3.0.2
Check: re-building of vignette outputs
Result: NOTE
Error in re-building vignettes:
...
Attaching package: ‘R.oo’
The following objects are masked from ‘package:methods’:
getClasses, getMethods
The following objects are masked from ‘package:base’:
attach, detach, gc, load, save
Loading required package: ape
Loading required package: compoisson
Loading required package: MASS
Loading required package: ggplot2
Warning in setEquDist.GeneralSubstitution(this, value, force = TRUE) :
The provided probabilities have been rescaled in order to sum to one!
Warning in insertSequence.Sequence(sequence, insert, insert.pos, process = process) :
The length of the sequence to be inserted is zero! Nothing to do here!
Warning in insertSequence.Sequence(sequence, insert, insert.pos, process = process) :
The length of the sequence to be inserted is zero! Nothing to do here!
Execution halted
Flavor: r-oldrel-osx-x86_64
Version: 3.0.2
Check: PDF version of manual
Result: FAIL
Flavor: r-oldrel-osx-x86_64