projections: Project Future Case Incidence

Provides functions and graphics for projecting daily incidence based on past incidence, and estimates of the serial interval and reproduction number. Projections are based on a branching process using a Poisson-distributed number of new cases per day, similar to the model used for estimating R0 in 'EpiEstim' or in 'earlyR', and described by Nouvellet et al. (2017) <doi:10.1016/j.epidem.2017.02.012>.

Version: 0.3.1
Depends: R (≥ 3.3.0)
Imports: stats, utils, incidence (≥ 1.4.1), distcrete, ggplot2
Suggests: testthat, vdiffr, roxygen2, knitr, rmarkdown, outbreaks, magrittr
Published: 2018-08-27
Author: Thibaut Jombart [aut, cre], Pierre Nouvellet [aut], Sangeeta Bhatia [ctb], Zhian N. Kamvar [ctb]
Maintainer: Thibaut Jombart <thibautjombart at>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: NEWS
CRAN checks: projections results


Reference manual: projections.pdf
Package source: projections_0.3.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X binaries: r-release: projections_0.3.1.tgz, r-oldrel: projections_0.3.1.tgz
Old sources: projections archive


Please use the canonical form to link to this page.