Handle genomic data within data frames just as you would with 'GRanges'. This packages provides method to deal with genomic intervals the "tidy-way" which makes it simpler to integrate in the the general data munging process. The API is inspired by the popular 'bedtools' and the genome_join() method from the 'fuzzyjoin' package.
| Version: | 0.1.0 |
| Imports: | dplyr, purrr, tidyr, fuzzyjoin (≥ 0.1.3), IRanges, Rcpp |
| LinkingTo: | Rcpp |
| Suggests: | testthat, knitr, rmarkdown |
| Published: | 2017-06-25 |
| Author: | Constantin Ahlmann-Eltze [aut, cre], Stan Developers [cph] (Code from the Stan Math library is reused in 'cluster_interval.cpp'), David Robinson [cph] (Code from the fuzzyjoin package is reused) |
| Maintainer: | Constantin Ahlmann-Eltze <artjom31415 at googlemail.com> |
| License: | GPL-3 |
| URL: | https://github.com/const-ae/tidygenomics |
| NeedsCompilation: | yes |
| Materials: | README |
| CRAN checks: | tidygenomics results |
| Reference manual: | tidygenomics.pdf |
| Vignettes: |
Tidy Genomics |
| Package source: | tidygenomics_0.1.0.tar.gz |
| Windows binaries: | r-devel: tidygenomics_0.1.0.zip, r-release: tidygenomics_0.1.0.zip, r-oldrel: tidygenomics_0.1.0.zip |
| OS X binaries: | r-release: tidygenomics_0.1.0.tgz, r-oldrel: tidygenomics_0.1.0.tgz |
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