Methods and feature set definitions for feature or gene set enrichment analysis in transcriptional and metabolic profiling data. Package includes tests for enrichment based on ranked lists of features, functions for visualisation and multivariate functional analysis.
| Version: | 0.40 |
| Depends: | R (≥ 2.10) |
| Imports: | beeswarm, tagcloud, XML, methods, plotwidgets |
| Suggests: | testthat, knitr, rmarkdown, pca3d, limma |
| Published: | 2018-11-29 |
| Author: | January Weiner |
| Maintainer: | January Weiner <january.weiner at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)] |
| URL: | http://bioinfo.mpiib-berlin.mpg.de/tmod/ |
| NeedsCompilation: | no |
| Materials: | NEWS ChangeLog |
| CRAN checks: | tmod results |
| Reference manual: | tmod.pdf |
| Vignettes: |
Transcriptional Modules Enrichment Analysis |
| Package source: | tmod_0.40.tar.gz |
| Windows binaries: | r-devel: tmod_0.40.zip, r-release: tmod_0.40.zip, r-oldrel: tmod_0.40.zip |
| OS X binaries: | r-release: tmod_0.40.tgz, r-oldrel: tmod_0.40.tgz |
| Old sources: | tmod archive |
| Reverse imports: | disco |
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