Reads in sample description and slide description files and annotates the expression values taken from GenePix results files (text file format used by many microarray scanner and software providers). After normalization data can be visualized as boxplot, heatmap or dotplot.
| Version: | 1.4.5 |
| Depends: | R (≥ 2.14) |
| Imports: | quantreg, limma, lattice, stats4, gam, gplots, grid, ggplot2, Hmisc, Biobase, methods, utils, graphics |
| Published: | 2018-01-15 |
| Author: | Heiko Mannsperger with contributions of Stephan Gade |
| Maintainer: | Maren Sitte <maren.sitte at med.uni-goettingen.de> |
| License: | LGPL-2 | LGPL-2.1 | LGPL-3 [expanded from: LGPL] |
| NeedsCompilation: | no |
| CRAN checks: | RPPanalyzer results |
| Reference manual: | RPPanalyzer.pdf |
| Vignettes: |
An R Package to read, normalize and visualize RPPA data |
| Package source: | RPPanalyzer_1.4.5.tar.gz |
| Windows binaries: | r-devel: RPPanalyzer_1.4.5.zip, r-release: RPPanalyzer_1.4.5.zip, r-oldrel: RPPanalyzer_1.4.5.zip |
| OS X binaries: | r-release: RPPanalyzer_1.4.5.tgz, r-oldrel: RPPanalyzer_1.4.5.tgz |
| Old sources: | RPPanalyzer archive |
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