dpcR: Digital PCR Analysis

Analysis, visualisation and simulation of digital polymerase chain reaction (dPCR) (Burdukiewicz et al. (2016) <doi:10.1016/j.bdq.2016.06.004>). Supports data formats of commercial systems (Bio-Rad QX100 and QX200; Fluidigm BioMark) and other systems.

Version: 0.5
Depends: R (≥ 3.0.0), methods
Imports: binom, chipPCR, e1071, evd, dgof, multcomp, qpcR, pracma, rateratio.test, readxl, signal, shiny, spatstat
Suggests: digest, DT, ggplot2, knitr, markdown, rhandsontable, rmarkdown, shinythemes, xtable
Published: 2019-02-03
Author: Michal Burdukiewicz ORCID iD [cre, aut], Stefan Roediger ORCID iD [aut], Bart Jacobs [aut], Piotr Sobczyk [ctb], Andrej-Nikolai Spiess [ctb]
Maintainer: Michal Burdukiewicz <michalburdukiewicz at gmail.com>
BugReports: https://github.com/michbur/dpcR/issues
License: GPL-3
URL: https://github.com/michbur/dpcR
NeedsCompilation: no
Citation: dpcR citation info
Materials: README ChangeLog
CRAN checks: dpcR results

Downloads:

Reference manual: dpcR.pdf
Vignettes: dpcR package - an overview
Package source: dpcR_0.5.tar.gz
Windows binaries: r-devel: dpcR_0.5.zip, r-release: dpcR_0.5.zip, r-oldrel: dpcR_0.5.zip
OS X binaries: r-release: dpcR_0.5.tgz, r-oldrel: dpcR_0.5.tgz
Old sources: dpcR archive

Linking:

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