[aut, cre, cph],
Luis Alvarez [ctb, cph],
Sergi Padilla-Parra [ctb, ths,
cph]Calculation of molecular number and brightness from fluorescence microscopy image series. The software was published in a 2016 paper <doi:10.1093/bioinformatics/btx434>. The seminal paper for the technique is Digman et al. 2008 <doi:10.1529/biophysj.107.114645>. A review of the technique was published in 2017 <doi:10.1016/j.ymeth.2017.12.001>.
| Version: | 2.0.0 |
| Imports: | Rcpp, filesstrings (≥ 3.0.0), magrittr, autothresholdr (≥ 1.3.0), dplyr, stringr, purrr, checkmate, detrendr (≥ 0.6.0), ijtiff (≥ 1.5.0), rlang, stats, MASS, reshape2, viridis, glue, BBmisc, ggplot2, assertthat, utils |
| LinkingTo: | Rcpp |
| Suggests: | knitr, rmarkdown, covr, testthat, abind, clipr, ore (≥ 1.4.0), styler, tidyr, mgcv, gridExtra, pacman, matrixStats, spelling |
| Published: | 2018-11-11 |
| Author: | Rory Nolan [aut, cre, cph],
Luis Alvarez [ctb, cph],
Sergi Padilla-Parra [ctb, ths,
cph] |
| Maintainer: | Rory Nolan <rorynoolan at gmail.com> |
| BugReports: | https://github.com/rorynolan/nandb/issues |
| License: | BSD_3_clause + file LICENSE |
| URL: | https://github.com/rorynolan/nandb |
| NeedsCompilation: | yes |
| Language: | en-US |
| Citation: | nandb citation info |
| Materials: | NEWS |
| CRAN checks: | nandb results |
| Reference manual: | nandb.pdf |
| Vignettes: |
Batch mode Brightness timeseries Calculating brightness with single images |
| Package source: | nandb_2.0.0.tar.gz |
| Windows binaries: | r-devel: nandb_2.0.0.zip, r-release: nandb_2.0.0.zip, r-oldrel: nandb_2.0.0.zip |
| OS X binaries: | r-release: nandb_2.0.0.tgz, r-oldrel: nandb_2.0.0.tgz |
| Old sources: | nandb archive |
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