MetamapsDB: Network Analysis of Metabolic Pathways and Gene Based Assemblies in Metagenomics

Functions for path based queries against 'Omics' <>, a 'NEO4J' <> database populated with data from metagenomic surveys and their accompanying metabolic and taxonomic annotations.

Version: 0.0.2
Depends: R (≥ 3.1.1)
Imports: IRanges, ShortRead, future, GenomicRanges, forcats, ggplot2, purrr, gridExtra, lubridate, zoo, magrittr, stats, utils, grDevices, parallel, RJSONIO, RCurl, igraph, rgexf, dplyr (≥, Matrix (≥ 1.2-12), stringr, tidyr, shiny, base64enc, cluster, DBI, RSQLite, data.table, httr
Published: 2017-12-06
Author: Wesley GOI
Maintainer: Wesley GOI <wesley at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Materials: README
CRAN checks: MetamapsDB results


Reference manual: MetamapsDB.pdf
Package source: MetamapsDB_0.0.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X binaries: r-release: not available, r-oldrel: MetamapsDB_0.0.2.tgz


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