Tools for transferable species distribution modeling and pseudo-absence data generation allowing the straightforward design of relatively complex experiments with multiple factors affecting the uncertainty (variability) of SDM outputs (pseudo-absence sample, climate projection, modeling algorithm, etc.), and the quantification of the contribution of different factors to the final variability following the method described in Deque el al. (2010) <doi:10.1007/s00382-011-1053-x>. Multiple methods for pseudo-absence data generation can be applied, including the novel Three-step method as described in Iturbide et al. (2015) <doi:10.1016/j.ecolmodel.2015.05.018>. Additionally, a function for niche overlap calculation is provided, considering the metrics described in Warren et al. (2008) <10.1111/j.1558-5646.2008.00482.x> and in Pianka (1973) <10.1146/annurev.es.04.110173.000413>.
| Version: | 1.0.1 |
| Depends: | R (≥ 3.4.0), raster, sp |
| Imports: | splancs, spam, spatstat, sampling, dismo, rpart, tree, e1071, earth, randomForest, PresenceAbsence, lattice, graphics, grDevices, gtools, ranger, abind |
| Suggests: | rJava (≥ 0.5-0), caret (≥ 6.0-76) |
| Published: | 2018-02-13 |
| Author: | Maialen Iturbide [aut, cre], Joaquin Bedia [ctb], SantanderMetGroup http://meteo.unican.es [ctb] |
| Maintainer: | Maialen Iturbide <miturbide at ifca.unican.es> |
| BugReports: | https://github.com/SantanderMetGroup/mopa/issues |
| License: | GPL-3 |
| URL: | https://github.com/SantanderMetGroup/mopa/wiki |
| NeedsCompilation: | no |
| Citation: | mopa citation info |
| CRAN checks: | mopa results |
| Reference manual: | mopa.pdf |
| Package source: | mopa_1.0.1.tar.gz |
| Windows binaries: | r-devel: mopa_1.0.1.zip, r-release: mopa_1.0.1.zip, r-oldrel: mopa_1.0.1.zip |
| OS X binaries: | r-release: mopa_1.0.1.tgz, r-oldrel: mopa_1.0.1.tgz |
| Old sources: | mopa archive |
Please use the canonical form https://CRAN.R-project.org/package=mopa to link to this page.