Identifies the locations of neurons, and estimates their calcium concentrations over time using the SCALPEL method proposed in Petersen, A., Simon, N., and Witten, D. SCALPEL: Extracting Neurons from Calcium Imaging Data <https://ajpetecom.files.wordpress.com/2017/12/scalpel_dec17.pdf>, which is to appear in the Annals of Applied Statistics.
| Version: | 1.0.1 |
| Imports: | Matrix, R.matlab, protoclust, igraph, SDMTools, gam |
| Suggests: | knitr, rmarkdown |
| Published: | 2018-09-28 |
| Author: | Ashley Petersen |
| Maintainer: | Ashley Petersen <ashleyjpete at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | www.ajpete.com/software |
| NeedsCompilation: | no |
| CRAN checks: | scalpel results |
| Reference manual: | scalpel.pdf |
| Package source: | scalpel_1.0.1.tar.gz |
| Windows binaries: | r-devel: scalpel_1.0.1.zip, r-release: scalpel_1.0.1.zip, r-oldrel: scalpel_1.0.1.zip |
| OS X binaries: | r-release: scalpel_1.0.1.tgz, r-oldrel: scalpel_1.0.1.tgz |
| Old sources: | scalpel archive |
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