scalpel: Processes Calcium Imaging Data

Identifies the locations of neurons, and estimates their calcium concentrations over time using the SCALPEL method proposed in Petersen, A., Simon, N., and Witten, D. SCALPEL: Extracting Neurons from Calcium Imaging Data <>, which is to appear in the Annals of Applied Statistics.

Version: 1.0.1
Imports: Matrix, R.matlab, protoclust, igraph, SDMTools, gam
Suggests: knitr, rmarkdown
Published: 2018-09-28
Author: Ashley Petersen
Maintainer: Ashley Petersen <ashleyjpete at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: scalpel results


Reference manual: scalpel.pdf
Package source: scalpel_1.0.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X binaries: r-release: scalpel_1.0.1.tgz, r-oldrel: scalpel_1.0.1.tgz
Old sources: scalpel archive


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