kinship2: Pedigree Functions
Routines to handle family data with a pedigree object. The initial purpose was to create correlation structures that describe
family relationships such as kinship and identity-by-descent, which
can be used to model family data in mixed effects models, such as in the
coxme function. Also includes a tool for pedigree drawing which is
focused on producing compact layouts without intervention. Recent additions
include utilities to trim the pedigree object with various criteria, and
kinship for the X chromosome.
| Version: |
1.6.4 |
| Depends: |
R (≥ 3.1.0), Matrix, quadprog |
| Imports: |
graphics, stats, methods |
| Published: |
2015-08-03 |
| Author: |
Terry M Therneau [aut],
Schaid Daniel [ctb],
Jason Sinnwell [aut, cre],
Elizabeth Atkinson [ctb] |
| Maintainer: |
Jason Sinnwell <sinnwell.jason at mayo.edu> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: |
http://r-forge.r-project.org |
| NeedsCompilation: |
no |
| Materials: |
NEWS |
| CRAN checks: |
kinship2 results |
Downloads:
Reverse dependencies:
| Reverse depends: |
ElstonStewart, Familias, GESE, KMgene, MasterBayes, pedantics, pedgene |
| Reverse imports: |
FamEvent, famSKATRC, fat2Lpoly, GENLIB, LCAextend, Mega2R, MESS, optiSel, paramlink, RVFam, SimRVPedigree, SimRVSequences |
| Reverse suggests: |
coxme, gap, Mangrove, pbatR, seqMeta, solarius |
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