CRAN Package Check Results for Package SpaDES.core

Last updated on 2019-04-21 01:48:06 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.5 48.97 570.60 619.57 OK
r-devel-linux-x86_64-debian-gcc 0.2.5 39.79 465.31 505.10 OK
r-devel-linux-x86_64-fedora-clang 0.2.5 651.32 OK
r-devel-linux-x86_64-fedora-gcc 0.2.5 600.87 OK
r-devel-windows-ix86+x86_64 0.2.5 96.00 432.00 528.00 OK
r-patched-linux-x86_64 0.2.5 45.82 507.34 553.16 OK
r-patched-solaris-x86 0.2.5 901.70 WARN
r-release-linux-x86_64 0.2.5 36.04 497.28 533.32 OK
r-release-windows-ix86+x86_64 0.2.5 49.00 469.00 518.00 OK
r-release-osx-x86_64 0.2.5 WARN
r-oldrel-windows-ix86+x86_64 0.2.5 82.00 543.00 625.00 NOTE
r-oldrel-osx-x86_64 0.2.5 WARN

Check Details

Version: 0.2.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘i-introduction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘i-introduction.Rmd’
    
    --- re-building ‘ii-modules.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'igraph'
    
    The following objects are masked from 'package:stats':
    
     decompose, spectrum
    
    The following object is masked from 'package:base':
    
     union
    
    Loading required package: quickPlot
    Loading required package: reproducible
    
    Attaching package: 'SpaDES.core'
    
    The following objects are masked from 'package:stats':
    
     end, start
    
    The following object is masked from 'package:utils':
    
     citation
    
    Loading required package: SpaDES.tools
    Loading required package: RandomFields
    Loading required package: sp
    Loading required package: RandomFieldsUtils
    
    Attaching package: 'RandomFields'
    
    The following object is masked from 'package:RandomFieldsUtils':
    
     RFoptions
    
    Setting:
     options(
     spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
     )
    Paths set to:
     options(
     reproducible.cachePath = '/tmp/RtmpBGaOO4/reproducible/cache'
     spades.inputPath = '/tmp/RtmpC2aiEw/SpaDES/inputs'
     spades.outputPath = '/tmp/RtmpC2aiEw/SpaDES/outputs'
     spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
     )
    Quitting from lines 376-382 (ii-modules.Rmd)
    Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
    there is no package called 'webshot'
    --- failed re-building ‘ii-modules.Rmd’
    
    --- re-building ‘iii-cache.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: sp
    
    Attaching package: 'raster'
    
    The following object is masked from 'package:magrittr':
    
     extract
    
    Loading required package: quickPlot
    Loading required package: reproducible
    
    Attaching package: 'SpaDES.core'
    
    The following objects are masked from 'package:stats':
    
     end, start
    
    The following object is masked from 'package:utils':
    
     citation
    
    Setting:
     options(
     spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
     )
    Paths set to:
     options(
     reproducible.cachePath = '/tmp/RtmpBGaOO4/reproducible/cache'
     spades.inputPath = '/tmp/RtmpC2aiEw/SpaDES/inputs'
     spades.outputPath = '/tmp/RtmpC2aiEw/SpaDES/outputs'
     spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
     )
    --- finished re-building ‘iii-cache.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘ii-modules.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.2.5
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Loading required package: RandomFields
    Loading required package: sp
    Loading required package: RandomFieldsUtils
    
    Attaching package: 'RandomFields'
    
    The following object is masked from 'package:RandomFieldsUtils':
    
     RFoptions
    
    Setting:
     options(
     spades.modulePath = '/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.5/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Paths set to:
     options(
     reproducible.cachePath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpJ09Udo/reproducible/cache'
     spades.inputPath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpsLoOb1/SpaDES/inputs'
     spades.outputPath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpsLoOb1/SpaDES/outputs'
     spades.modulePath = '/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.5/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Quitting from lines 376-382 (ii-modules.Rmd)
    Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-release-osx-x86_64

Version: 0.2.5
Check: R code for possible problems
Result: NOTE
    .setupCl: no visible global function definition for 'isFALSE'
    Undefined global functions or variables:
     isFALSE
Flavors: r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.2.5
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Loading required package: RandomFields
    Loading required package: sp
    Loading required package: RandomFieldsUtils
    
    Attaching package: 'RandomFields'
    
    The following object is masked from 'package:RandomFieldsUtils':
    
     RFoptions
    
    Setting:
     options(
     spades.modulePath = '/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.4/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Paths set to:
     options(
     reproducible.cachePath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/RtmpkaXFni/reproducible/cache'
     spades.inputPath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/Rtmpk7HpNW/SpaDES/inputs'
     spades.outputPath = '/private/var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T/Rtmpk7HpNW/SpaDES/outputs'
     spades.modulePath = '/Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.4/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Quitting from lines 376-382 (ii-modules.Rmd)
    Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-oldrel-osx-x86_64