CRAN Package Check Results for Package msde

Last updated on 2019-04-21 01:47:56 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.4 46.09 145.47 191.56 OK
r-devel-linux-x86_64-debian-gcc 1.0.4 35.19 113.09 148.28 OK
r-devel-linux-x86_64-fedora-clang 1.0.4 250.31 OK
r-devel-linux-x86_64-fedora-gcc 1.0.4 229.05 OK
r-devel-windows-ix86+x86_64 1.0.4 101.00 313.00 414.00 OK
r-patched-linux-x86_64 1.0.4 39.94 144.47 184.41 OK
r-patched-solaris-x86 1.0.4 348.30 OK
r-release-linux-x86_64 1.0.4 39.56 141.39 180.95 OK
r-release-windows-ix86+x86_64 1.0.4 77.00 316.00 393.00 OK
r-release-osx-x86_64 1.0.4 OK
r-oldrel-windows-ix86+x86_64 1.0.4 69.00 320.00 389.00 ERROR
r-oldrel-osx-x86_64 1.0.4 OK

Additional issues

clang-UBSAN gcc-UBSAN

Check Details

Version: 1.0.4
Check: running tests for arch ‘i386’
Result: ERROR
     Running 'testthat.R' [88s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(msde)
     >
     > Sys.unsetenv("R_TESTS")
     > test_check("msde")
     In file included from msde-14b94354f6342_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h: In member function 'Numeric sdeRobj<sMod, sPi>::Prior(Numeric, Numeric, bool, bool, int, List) [with sMod = sdeModel; sPi = sdePrior; Numeric = Rcpp::Vector<14, Rcpp::PreserveStorage>; List = Rcpp::Vector<19>]':
     D:/temp/Rtmpg50EGt/sdePrior.h:63:15: warning: 'prior.sdePrior::tmpZ' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] tmpZ;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b94354f6342_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::tmpZ' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeUtils.h:7:0,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:12,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166,
     from msde-14b94354f6342_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/mvnUtils.h:79:16: warning: 'prior.sdePrior::tmpX' may be used uninitialized in this function [-Wmaybe-uninitialized]
     resi = x[ii] - mean[ii];
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b94354f6342_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::tmpX' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b94354f6342_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:61:15: warning: 'prior.sdePrior::cholSd' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] cholSd;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b94354f6342_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::cholSd' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeUtils.h:7:0,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:12,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166,
     from msde-14b94354f6342_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/mvnUtils.h:79:27: warning: 'prior.sdePrior::mean' may be used uninitialized in this function [-Wmaybe-uninitialized]
     resi = x[ii] - mean[ii];
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b94354f6342_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::mean' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b94354f6342_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:68:17: warning: 'prior.sdePrior::dataId' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] dataId;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b94354f6342_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::dataId' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b94354f6342_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:65:17: warning: 'prior.sdePrior::paramId' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] paramId;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b94354f6342_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::paramId' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b94354f6342_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:67:5: warning: 'prior.sdePrior::nDataRV' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nDataRV > 0) {
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b94354f6342_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::nDataRV' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b94354f6342_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:64:5: warning: 'prior.sdePrior::nParamRV' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nParamRV > 0) {
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b94354f6342_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::nParamRV' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b944cb11adf_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h: In member function 'Numeric sdeRobj<sMod, sPi>::Prior(Numeric, Numeric, bool, bool, int, List) [with sMod = sdeModel; sPi = sdePrior; Numeric = Rcpp::Vector<14, Rcpp::PreserveStorage>; List = Rcpp::Vector<19>]':
     D:/temp/Rtmpg50EGt/sdePrior.h:63:15: warning: 'prior.sdePrior::tmpZ' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] tmpZ;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b944cb11adf_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::tmpZ' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeUtils.h:7:0,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:12,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166,
     from msde-14b944cb11adf_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/mvnUtils.h:79:16: warning: 'prior.sdePrior::tmpX' may be used uninitialized in this function [-Wmaybe-uninitialized]
     resi = x[ii] - mean[ii];
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b944cb11adf_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::tmpX' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b944cb11adf_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:61:15: warning: 'prior.sdePrior::cholSd' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] cholSd;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b944cb11adf_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::cholSd' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeUtils.h:7:0,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:12,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166,
     from msde-14b944cb11adf_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/mvnUtils.h:79:27: warning: 'prior.sdePrior::mean' may be used uninitialized in this function [-Wmaybe-uninitialized]
     resi = x[ii] - mean[ii];
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b944cb11adf_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::mean' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b944cb11adf_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:68:17: warning: 'prior.sdePrior::dataId' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] dataId;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b944cb11adf_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::dataId' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b944cb11adf_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:65:17: warning: 'prior.sdePrior::paramId' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] paramId;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b944cb11adf_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::paramId' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b944cb11adf_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:67:5: warning: 'prior.sdePrior::nDataRV' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nDataRV > 0) {
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b944cb11adf_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::nDataRV' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b944cb11adf_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:64:5: warning: 'prior.sdePrior::nParamRV' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nParamRV > 0) {
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b944cb11adf_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::nParamRV' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b9468264978_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h: In member function 'Numeric sdeRobj<sMod, sPi>::Prior(Numeric, Numeric, bool, bool, int, List) [with sMod = sdeModel; sPi = sdePrior; Numeric = Rcpp::Vector<14, Rcpp::PreserveStorage>; List = Rcpp::Vector<19>]':
     D:/temp/Rtmpg50EGt/sdePrior.h:63:15: warning: 'prior.sdePrior::tmpZ' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] tmpZ;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b9468264978_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::tmpZ' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeUtils.h:7:0,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:12,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166,
     from msde-14b9468264978_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/mvnUtils.h:79:16: warning: 'prior.sdePrior::tmpX' may be used uninitialized in this function [-Wmaybe-uninitialized]
     resi = x[ii] - mean[ii];
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b9468264978_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::tmpX' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b9468264978_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:61:15: warning: 'prior.sdePrior::cholSd' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] cholSd;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b9468264978_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::cholSd' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeUtils.h:7:0,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:12,
     from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166,
     from msde-14b9468264978_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/mvnUtils.h:79:27: warning: 'prior.sdePrior::mean' may be used uninitialized in this function [-Wmaybe-uninitialized]
     resi = x[ii] - mean[ii];
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b9468264978_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::mean' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b9468264978_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:68:17: warning: 'prior.sdePrior::dataId' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] dataId;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b9468264978_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::dataId' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b9468264978_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:65:17: warning: 'prior.sdePrior::paramId' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] paramId;
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b9468264978_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::paramId' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b9468264978_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:67:5: warning: 'prior.sdePrior::nDataRV' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nDataRV > 0) {
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b9468264978_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::nDataRV' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     In file included from msde-14b9468264978_Exports.cpp:12:0:
     D:/temp/Rtmpg50EGt/sdePrior.h:64:5: warning: 'prior.sdePrior::nParamRV' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nParamRV > 0) {
     ^
     In file included from D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeInterface.h:166:0,
     from msde-14b9468264978_Exports.cpp:10:
     D:/temp/RtmpmikDsc/RLIBS_113dc58ed4eab/msde/include/sdeRUtils.h:152:7: note: 'prior.sdePrior::nParamRV' was declared here
     sPi prior(priorArgs.phi, priorArgs.nArgs, priorArgs.nEachArg);
     ^
     -- 1. Failure: lpi.R == lpi.cpp -----------------------------------------------
     mxd[ii, 2] not equal to 0.
     1/1 mismatches
     [1] 1.31e-06 - 0 == 1.31e-06
    
     == testthat results ===========================================================
     OK: 797 SKIPPED: 0 FAILED: 1
     1. Failure: lpi.R == lpi.cpp
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64