An implementation of the Bayesian Clearance Estimator (Fogarty et al. (2015) <doi:10.1111/biom.12307>). It takes serial measurements of a response on an individual (e.g., parasite load after treatment) that is decaying over time and performs Bayesian hierarchical regression of the clearance rates on the given covariates. This package provides tools to calculate WWARN PCE (WorldWide Antimalarial Resistance Network's Parasite Clearance Estimator) estimates of the clearance rates as well. A tutorial appeared in Sharifi-Malvajerdi et al. (2019) <doi:10.1186/s12936-018-2631-8>.
| Version: | 1.0.3 |
| Depends: | R (≥ 3.0.0) |
| Imports: | stats, MCMCpack, MASS, msm, mvtnorm, survival, AER, Cairo, graphics, grDevices, utils |
| Suggests: | knitr, rmarkdown |
| Published: | 2019-01-28 |
| Author: | Colin B. Fogarty [cre], Saeed Sharifi-Malvajerdi [aut], Feiyu Zhu [aut] |
| Maintainer: | Colin B. Fogarty <cfogarty at mit.edu> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Citation: | bhrcr citation info |
| CRAN checks: | bhrcr results |
| Reference manual: | bhrcr.pdf |
| Vignettes: |
Quick tutorial for using bhrcr |
| Package source: | bhrcr_1.0.3.tar.gz |
| Windows binaries: | r-devel: bhrcr_1.0.3.zip, r-release: bhrcr_1.0.3.zip, r-oldrel: bhrcr_1.0.3.zip |
| OS X binaries: | r-release: bhrcr_1.0.3.tgz, r-oldrel: bhrcr_1.0.3.tgz |
| Old sources: | bhrcr archive |
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