[aut, cre],
Luis Alvarez [ctb, cph],
Sergi Padilla-Parra [ctb, ths,
cph]Detrend fluorescence microscopy image series for fluorescence fluctuation and correlation spectroscopy ('FCS' and 'FFS') analysis. This package contains functionality published in a 2016 paper <doi:10.1093/bioinformatics/btx434> but it has been extended since then with the Robin Hood algorithm and thus contains unpublished work.
| Version: | 0.6.1 |
| Imports: | Rcpp, RcppParallel, parallel, checkmate, magrittr, dplyr, foreach, doParallel, iterators, purrr, ijtiff (≥ 1.5.0), autothresholdr (≥ 1.3.0), rlang, stringr, filesstrings (≥ 3.0.0), plyr, glue (≥ 1.3.0), sigmoid, matrixStats, stringi, assertthat |
| LinkingTo: | Rcpp, RcppParallel |
| Suggests: | testthat, knitr, rmarkdown, covr, abind, lattice, pacman, tidyr, graphics, gridExtra, arrayhelpers, ore (≥ 1.4.0), clipr, styler, MASS, mgcv, spelling |
| Published: | 2019-04-13 |
| Author: | Rory Nolan [aut, cre],
Luis Alvarez [ctb, cph],
Sergi Padilla-Parra [ctb, ths,
cph] |
| Maintainer: | Rory Nolan <rorynoolan at gmail.com> |
| BugReports: | https://www.github.com/rorynolan/detrendr/issues |
| License: | BSD_3_clause + file LICENSE |
| URL: | https://rorynolan.github.io/detrendr, https://www.github.com/rorynolan/detrendr |
| NeedsCompilation: | yes |
| SystemRequirements: | GNU make |
| Language: | en-US |
| Citation: | detrendr citation info |
| Materials: | NEWS |
| CRAN checks: | detrendr results |
| Reference manual: | detrendr.pdf |
| Vignettes: |
Batch mode Detrending single images |
| Package source: | detrendr_0.6.1.tar.gz |
| Windows binaries: | r-devel: detrendr_0.6.1.zip, r-release: detrendr_0.6.1.zip, r-oldrel: detrendr_0.6.1.zip |
| OS X binaries: | r-release: detrendr_0.6.1.tgz, r-oldrel: detrendr_0.6.0.tgz |
| Old sources: | detrendr archive |
| Reverse imports: | nandb |
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