g2f: Find and Fill Gaps in Metabolic Networks

For a given metabolic network, this package finds the gaps (metabolites not produced or not consumed in any other reaction), and fills it from the stoichiometric reactions of a reference metabolic reconstruction using a weighting function. Also the option to download all the set of gene-associated stoichiometric reactions for a specific organism from the KEGG database <http://www.genome.jp/kegg/> is available.

Version: 0.2
Imports: KEGGREST, minval (≥ 0.5), sybil
Published: 2018-03-18
Author: Daniel Osorio [aut, cre], Kelly Botero [aut], Janneth Gonzalez [aut, ths], Andres Pinzon [aut]
Maintainer: Daniel Osorio <dcosorioh at unal.edu.co>
License: GPL-2
NeedsCompilation: no
Materials: README
CRAN checks: g2f results


Reference manual: g2f.pdf
Package source: g2f_0.2.tar.gz
Windows binaries: r-devel: g2f_0.2.zip, r-release: g2f_0.2.zip, r-oldrel: g2f_0.2.zip
OS X binaries: r-release: g2f_0.2.tgz, r-oldrel: g2f_0.2.tgz
Old sources: g2f archive


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