Last updated on 2019-05-01 01:52:17 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| sybilccFBA | 7 | 4 | |
| sybilcycleFreeFlux | 1 | 6 | 4 |
| sybilDynFBA | 11 |
Current CRAN status: NOTE: 7, OK: 4
Version: 3.0.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘cplexAPI’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 3.0.0
Check: installed package size
Result: NOTE
installed size is 5.2Mb
sub-directories of 1Mb or more:
extdata 4.2Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 3.0.0
Check: data for non-ASCII characters
Result: NOTE
Note: found 1 marked UTF-8 string
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64
Current CRAN status: ERROR: 1, NOTE: 6, OK: 4
Version: 2.0.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘cplexAPI’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64
Version: 2.0.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: ‘cplexAPI’ ‘glpkAPI’
Flavor: r-oldrel-osx-x86_64
Version: 2.0.0
Check: examples
Result: ERROR
Running examples in ‘sybilcycleFreeFlux-Ex.R’ failed
The error most likely occurred in:
> ### Name: cfFBA
> ### Title: cycle free flux
> ### Aliases: cfFBA lrFBA
> ### Keywords: cycle free flux loopless FBA
>
> ### ** Examples
>
> ##---- Should be DIRECTLY executable !! ----
> ##-- ==> Define data, use random,
> ##-- or do help(data=index) for the standard data sets.
> data(iAF1260)
> model=iAF1260
> fba=optimizeProb(model)
Loading required package: glpkAPI
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called ‘glpkAPI’
Error in checkDefaultMethod(solver, method, pType) :
package ‘glpkAPI’ not found
Calls: optimizeProb -> optimizeProb -> .local -> sysBiolAlg
Execution halted
Flavor: r-oldrel-osx-x86_64
Current CRAN status: OK: 11